Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5285 ATGACAACCATTTTCACAAGCTCCCGTTTTCTACTAAAAACTCTGAAATTCACCTCACATTCAAACGCCGTTAATCTAAGAAGCTTCCGTTTATCAAGAATGAACACTTCAGCTAGGGTTTCCAGTAATGGTGGCGGCGGTTTAGTTCGCTTTCCGTTATCTTCATCCAATGCTTTGATCATTCAGAAAGGTGATATCACCAAATGGTCCATCGATGGTTCCACTGATGCAATTGTAAATCCTGCAAATGAGAGAATGCTTGGAGGTGGTGGTGCTGATGGAGCTATACATAGGGCTGCAGGTCCAGATCTTCTTAGAGCATGCCGGAATGTTCCAGAAGTTAGGCCTGGAGTTCGCTGTCCAACGGGGGAAGCAAGGATCACACCAGGTTTCTTGCTGCCCGCTTCTCATGTTATTCATACTGTTGGCCCAATCTACGATGTTGATAGTAATCCTGCTGCCTCTCTGGCAAGTGCTTACAGGAATAGTTTGAGGGTTGCGAAAGAGAACAACATTCAGTATATTGCATTTCCAGCCATATCATGTGGTGTCTACGGATATCCTTACGATGAAGCTGCTACTGTGGCAATTTCTACCATCAAAGAGTTCCATAATGACTTTAAGGAGGTCCACTTCGTTCTCTTCGCGTCTGATATTTATGACATTTGGTTAAATAAGTCGGATGAATTGCTGAAAGATTAG 702 0.4359 MTTIFTSSRFLLKTLKFTSHSNAVNLRSFRLSRMNTSARVSSNGGGGLVRFPLSSSNALIIQKGDITKWSIDGSTDAIVNPANERMLGGGGADGAIHRAAGPDLLRACRNVPEVRPGVRCPTGEARITPGFLLPASHVIHTVGPIYDVDSNPAASLASAYRNSLRVAKENNIQYIAFPAISCGVYGYPYDEAATVAISTIKEFHNDFKEVHFVLFASDIYDIWLNKSDELLKD* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5285 233 ProSiteProfiles Macro domain profile. 46 231 IPR002589 -
Mal1g5285 233 SUPERFAMILY Macro domain-like 58 228 IPR043472 -
Mal1g5285 233 SMART YBR022w_8 58 196 IPR002589 -
Mal1g5285 233 CDD Macro_OAADPr_deacetylase 59 226 - -
Mal1g5285 233 Pfam Macro domain 79 196 IPR002589 -
Mal1g5285 233 PANTHER MACRO DOMAIN-CONTAINING PROTEIN VPA0103-LIKE ISOFORM X1 20 232 - -
Mal1g5285 233 Gene3D Leucine Aminopeptidase, subunit E, domain 1 27 233 IPR043472 -
Mal1g5285 233 PANTHER GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED 20 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5285 Mal-Chr1 126063504 126067184 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5285 64 169 C2H2 Transcription Factor Family AT5G01310 35.294 1.67e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5285 K23518 - gmx:100811169 365.54