Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5260 ATGCCTCCTCAACTTCGAACCAGAAGAACAACCAAACAACAACAAAACCCGAATCAAAACCCGAATCCGATCGCAAAACCCGAACCCGCTGCACGAGGTAGAAGAGGTAGACCTGCGAGAAACCGTAACAACACCATCACCGCACGTGATCGTGAAATTGATAACCGAAACGAAACGCGTGAAGTGCAAGAACAAGAACAACAACATCACGTGCCGGTTCAAATTAGGGTTTCTGATAAGCAAGATATTATGGATGACGACTGTGATAGTGGTGGTGGTCGAACCGCCGCCTATAAAGGTCCGGTGGCTGAAGATGAAGGAAGCACACCTCCCATTCCTGAAAAAGTTCAAGTGGGTGGTTCACCGTTGTATAGAGTAGATAGAAAGCTTGGGAAAGGAGGATTTGGACAAGTTTATGTTGGTCGCCGTGTCGGTGCCGGAGCCGGTGCTGTTGAGGTGGCTTTAAAGTTTGAACATAAAAGCAGTAAAGGGTGTAATTATGGACCTCCTTACGAGTGGCAGGTTTACAATATATTAGGTGGTAGCCATGGTGTTCCACGAGTTCATTACAAGGGACGGCAAGGTGATTGGTATGTCATGGTCATGGATATTCTTGGCCCTAGTTTATGGGATGTTTGGAATAACAAGACACACACGATGTCTGCTGAAATGGTGTCGTGTATAGCAATCGAGGCTGTTTCCATATTAGAGAAGATGCATTCTAGAGGATATGTCCATGGTGATGTAAAACCTGAGAACTTTCTGCTTGGCCCTCCGGGTACTCATGAAGAGAAAAAGCTTTTTCTGGTTGATCTTGGATTAGCAACTCGTTGGCGTGATAATTCGACTGGTCTTCATGTTGATTACGATCAACGTCCAGATGTATTTAGGGGAACAGTTCGTTATGCTAGTGTACATGCTCATCTTGGTAGGACAGGTAGCAGAAGAGATGATTTGGAATCTCTTGCTTACACACTAATCTTCCTTCTTCGCGGACGGCTACCCTGGCAAGGATACCAGGGTGAAAATAAAGGATTTCTTGTTTGCAAGAAGAAAATGGCCACCTCGCCAGAAAATATGTGTATCCTCTGTCCCGCACCTTTTCGACAGTTTATTGAGTACGTGGTGAATTTGAAGTTCGACGAAGAACCAAACTATGCCAAATATATATCACTTTTTGATGGAATTGTTGGTCCAAATCCAGACATTAGACCCATAAATACTGACGGTGCACAAAAGCTTATCTATCAGGTTGGACAGAAGCGAGGACGGTTGACCATGGAAGAAGATGACGATGAGCAGCCAAAGAAGAAAGTCAGAATGGGAATGCCAGCTACACAATGGATTAGTGTGTACAATGCGCGCCGACCTATGAAGCAAAGGTACCATTACAATGTTGCTGATATGCGGTTGTCCCAACACATTGTTAAGGGATATGAAGATGGGTTATTTATCAGCAGTGTAGGTTGTTGCTCTAACCTTTGGGCACTGATTATGGATGCCGGTACTGGTTTCACTGCACAAGTTTATGAACTCTCATCCTCCTTCCTTCACAAGGAATGGATTATGGAACAGTGGGAAAAAAATTATTACATTAGTGCCATAGCAGGATCGAATAGTGGGAGCTCGTTGGTTGTAATGTCGAAAGGGACCCAATACTTGCAGCAATCCTATAAGGTCAGTGAATCATTTCCATTCAAGTGGATTAATAAAAAATGGAAAGAAGGATTTTTTGTCACTGCTATGGCCACTGCTGGAAGTAGATGGGCAATTGTTATGTCCCGTGGTGCTGGATTTTCAGATCAGGTAGTGGAGCTTGATTTCCTGTATCCTAGTGAAGGTATTCATCGAAGGTGGGACAATGGTTACCGCATCACTTCAACTGCTGCTACATATGACCAGGCTGCTCTTGTTCTTAGTATTCCAAGAAGAAAACCGACCGATGAAACTCAAGAGACACTTCGCACATCTGACTTTCCTAGTACTCATGTCAAGGAAAAATGGGCAAAGAACCTCTATATTGCATCTATTTGTTACGGAAGAACAGTTTCATGA 2055 0.4389 MPPQLRTRRTTKQQQNPNQNPNPIAKPEPAARGRRGRPARNRNNTITARDREIDNRNETREVQEQEQQHHVPVQIRVSDKQDIMDDDCDSGGGRTAAYKGPVAEDEGSTPPIPEKVQVGGSPLYRVDRKLGKGGFGQVYVGRRVGAGAGAVEVALKFEHKSSKGCNYGPPYEWQVYNILGGSHGVPRVHYKGRQGDWYVMVMDILGPSLWDVWNNKTHTMSAEMVSCIAIEAVSILEKMHSRGYVHGDVKPENFLLGPPGTHEEKKLFLVDLGLATRWRDNSTGLHVDYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKKKMATSPENMCILCPAPFRQFIEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPINTDGAQKLIYQVGQKRGRLTMEEDDDEQPKKKVRMGMPATQWISVYNARRPMKQRYHYNVADMRLSQHIVKGYEDGLFISSVGCCSNLWALIMDAGTGFTAQVYELSSSFLHKEWIMEQWEKNYYISAIAGSNSGSSLVVMSKGTQYLQQSYKVSESFPFKWINKKWKEGFFVTAMATAGSRWAIVMSRGAGFSDQVVELDFLYPSEGIHRRWDNGYRITSTAATYDQAALVLSIPRRKPTDETQETLRTSDFPSTHVKEKWAKNLYIASICYGRTVS* 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5260 684 MobiDBLite consensus disorder prediction 1 72 - -
Mal1g5260 684 PANTHER CASEIN KINASE-RELATED 85 657 - -
Mal1g5260 684 SMART serkin_6 124 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g5260 684 Coils Coil 48 68 - -
Mal1g5260 684 MobiDBLite consensus disorder prediction 1 21 - -
Mal1g5260 684 ProSiteProfiles Protein kinase domain profile. 124 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g5260 684 CDD STKc_CK1 124 393 - -
Mal1g5260 684 ProSitePatterns Protein kinases ATP-binding region signature. 130 156 IPR017441 GO:0005524
Mal1g5260 684 MobiDBLite consensus disorder prediction 44 72 - -
Mal1g5260 684 PANTHER - 85 657 - -
Mal1g5260 684 ProSitePatterns Serine/Threonine protein kinases active-site signature. 244 256 IPR008271 GO:0004672|GO:0006468
Mal1g5260 684 Pfam Protein kinase domain 124 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g5260 684 SUPERFAMILY Protein kinase-like (PK-like) 124 399 IPR011009 -
Mal1g5260 684 Gene3D Transferase(Phosphotransferase) domain 1 106 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5260 Mal-Chr1 125740722 125745629 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5260 123 279 EF-hand Containing Proteins AT2G17290 30.675 2.50e-08 55.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Mal1g5260 Pkinase 6.1e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5260 - - vvi:100254265 1117.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g5260 1 125740722 125745629 Mal1g5260 1 125740722 125745629 ECH
Mal2g1032 2 12086459 12091057 Mal1g5260 1 125740722 125745629 ECH