Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5251 ATGAGAGTTTCACCACAAAATTCAGAAACCGAGAGCACCTCAAATTCATCACCACCAACATCACCATCCTTAAACTCAATTCAAGAGAATCATGATCAAGAATCCAATAAGAAGCTTAAACGCAACCGTGACTCCAACAAACACCCCGTCTACCAAGGCGTTCGCATGAGAAACTGGGGAAAGTGGGTGTCTGAAATCCGCGAGCCTCGCAAAAAATCGCGGATTTGGTTAGGCACTTTCCCCACAGCTGAAATGGCTGCCAGAGCGCACGATGCTGCTGCGCTCTGTGTTAAAGGAAAATCCGCCATTCTAAATTTCCCTCACTTAGCCAATTCTCTTCCAAAACCCGCTTCTTTAGCCCCTCGCGATGTCCAGGCCGCGGCGGCTAAAGCAGCTAAAATGGACATTAGTAAATTTGAACTATCCTCATCTTCTTCTTCATTACCATCGTTGTCGTCTTCCCTGACAACGACGTCAACATCAACAAGTCTGTTAATGAAGACAACGAAAACACCGTCTTCATCAGCAGACTTGTCTGCTACTTCGGAAGAACTTAGTGAGATAATTGAGCTACCTACTTTGGAAAACGGTTATGATGATGTTGGGAAAGAGGAGTTTGTGTTTGTTGACTCACAATCACAAGACTATGCTTGGATGATGTATCAGCAACCAATGACATGGCTACAGACAACACAAGAAGATGGTTGTTGTGTTGGTGATGATGGATTTGTTAATAATAATGGTGTTGTAACTAGTTTTGAGAGTTTTCTTTGGAATTACTAG 783 0.4342 MRVSPQNSETESTSNSSPPTSPSLNSIQENHDQESNKKLKRNRDSNKHPVYQGVRMRNWGKWVSEIREPRKKSRIWLGTFPTAEMAARAHDAAALCVKGKSAILNFPHLANSLPKPASLAPRDVQAAAAKAAKMDISKFELSSSSSSLPSLSSSLTTTSTSTSLLMKTTKTPSSSADLSATSEELSEIIELPTLENGYDDVGKEEFVFVDSQSQDYAWMMYQQPMTWLQTTQEDGCCVGDDGFVNNNGVVTSFESFLWNY* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5251 260 Gene3D AP2/ERF domain 50 108 IPR036955 GO:0003700|GO:0006355
Mal1g5251 260 MobiDBLite consensus disorder prediction 1 30 - -
Mal1g5251 260 PRINTS Ethylene responsive element binding protein signature 73 89 IPR001471 GO:0003700|GO:0006355
Mal1g5251 260 PRINTS Ethylene responsive element binding protein signature 51 62 IPR001471 GO:0003700|GO:0006355
Mal1g5251 260 MobiDBLite consensus disorder prediction 1 52 - -
Mal1g5251 260 Pfam AP2 domain 49 99 IPR001471 GO:0003700|GO:0006355
Mal1g5251 260 MobiDBLite consensus disorder prediction 31 50 - -
Mal1g5251 260 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 3-LIKE 5 259 - -
Mal1g5251 260 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 5 259 - -
Mal1g5251 260 SMART rav1_2 50 113 IPR001471 GO:0003700|GO:0006355
Mal1g5251 260 CDD AP2 51 109 IPR001471 GO:0003700|GO:0006355
Mal1g5251 260 SUPERFAMILY DNA-binding domain 50 108 IPR016177 GO:0003677
Mal1g5251 260 ProSiteProfiles AP2/ERF domain profile. 50 107 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5251 Mal-Chr1 125615066 125615848 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5251 33 234 AP2-EREBP Transcription Factor Family AT5G11590 55.072 5.65e-63 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mal1g5251 AP2 7.8e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5251 K09286 - gmx:100305349 230.72