Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5246 ATGGAAAAGGTTGTTGGAGGAAAGTATAGGATTGGTAGGAAAATTGGTAGTGGATCATTTGGTGAAATTTATATTGGGGCACATGTTGTGACTTCTGAGCTTGTGGCCATTAAGAAGGAGAAGAAGAAAACACAACAACCACAGCTACTATATGAGGCAAAGTTATATAATATTCTTAAAGGAGGAAGTGGAATTCCAAGAATGAAATGGTTTGGTACTGATGGAGACTATAATGTTCTAGTTCTTGAACTTATGGGGCCGAGTCTCGATGACCTCCTTTACTACTGTAGTGGGAAGTTTTCGCTAAAATCGGTTTTGATGTTGGCCGATCAAATGCTTACGAGGATAGAGTATTTACATTCCAAGGGATTACTACATAGAGATATCAAACCGGATAACTTTCTTATGGGTCTTGGGAAGAAAGCAAATCAGGTTTGTATGATTGATTTTGGACTTTCAAAAGGATACAGGGATCCTATCAGTTACAAGCATATCCCTTACAGAGAGAACAAAAACTTAACAGGAACTGCGCGTTATGCAAGTAGCAATACTCACAAAGGAATTGAGCAAAGCCGCAGAGATGATTTGGAGTCTCTTGGCTATGTTCTTTTGTACTTTTTAAGAGGAAGCCTTCCTTGGCAAGGTCTGCAAGCTGCCAACAGAATGCAAAAATATGAAAAGATATGCGAAACGAAGTTATCAACTCCCATTGAGGTACTTTGTAAGTCATGTCCTGTGGAGTTTGCTTCTTACTTTCATTATTGTCGCTCCTTGAAATTTGATCAACGACCAGATTATGGATATTTGAAGCGCCTGTTTCGTGAATTGTTCACTTCTAAAGGATATGATGCCGACTATTTATATGACTGGACGATTTTAAAATATCAGGAGATTCAACAGATAAAGGAACAAAATCAATCAATAGCTCCAGTTGCTGTGCCTACCAGTCTTGAACCAGAGGATGTGGATGAGCATACAGAATACAATGATTGTACTCAAAATGCTGTGGCAAAACCAAAAATCTATACCGACCGTCCACGTGTTTGTATGAAACTCAGGGTAGCTAATGTCGACAATCTTGATGATGAGATTCAAACAGAGAAACAAAATGTGAATACTGATTTACCTATTTCTACTATCATGCCTATAGTCACGACAGAAGATGCTCCAAAACCAGAAAGGACTGTAGAAACCTCAAACCCAGATGGTGTGTTAGGGAGTAAATGCGGTGCTTCTGATGACATTGTTTCTTCACTACGCCGAGTTTCATCCATCAATTAG 1281 0.3903 MEKVVGGKYRIGRKIGSGSFGEIYIGAHVVTSELVAIKKEKKKTQQPQLLYEAKLYNILKGGSGIPRMKWFGTDGDYNVLVLELMGPSLDDLLYYCSGKFSLKSVLMLADQMLTRIEYLHSKGLLHRDIKPDNFLMGLGKKANQVCMIDFGLSKGYRDPISYKHIPYRENKNLTGTARYASSNTHKGIEQSRRDDLESLGYVLLYFLRGSLPWQGLQAANRMQKYEKICETKLSTPIEVLCKSCPVEFASYFHYCRSLKFDQRPDYGYLKRLFRELFTSKGYDADYLYDWTILKYQEIQQIKEQNQSIAPVAVPTSLEPEDVDEHTEYNDCTQNAVAKPKIYTDRPRVCMKLRVANVDNLDDEIQTEKQNVNTDLPISTIMPIVTTEDAPKPERTVETSNPDGVLGSKCGASDDIVSSLRRVSSIN* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5246 426 ProSiteProfiles Protein kinase domain profile. 9 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g5246 426 PANTHER CASEIN KINASE-RELATED 1 403 - -
Mal1g5246 426 PANTHER CASEIN KINASE I-LIKE PROTEIN 1 403 - -
Mal1g5246 426 ProSitePatterns Protein kinases ATP-binding region signature. 15 39 IPR017441 GO:0005524
Mal1g5246 426 Gene3D Transferase(Phosphotransferase) domain 1 1 342 - -
Mal1g5246 426 Pfam Protein kinase domain 9 229 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g5246 426 SUPERFAMILY Protein kinase-like (PK-like) 5 290 IPR011009 -
Mal1g5246 426 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Mal1g5246 426 SMART serkin_6 9 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5246 Mal-Chr1 125578058 125582205 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5246 8 213 MAP Kinase Kinase Kinase AT1G54960 29.864 1.53e-16 80.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Mal1g5246 Pkinase 3.5e-30 CL0016