Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5228 ATGGACGGTGAACGAAAAATCGCCGTTCCTCAGGTCGATGGGCCCATTGATAGTGTTGAGAAAGTTCGAGCAGCATTACATGGGAGGACTACTGGTCCTACAAGGCGTTCTACAAAAGGGCAATGGACTCCCGAGGAGGATGAGACATTGCGAAAGGCTGTTCAGCATTTCCAAGGAAAAAATTGGAAAAAAATAGCGGAGTGTTTCAAGGATAGAACTGATGTGCAGTGCTTACATAGGTGGCAGAAAGTGTTGAATCCTGAACTTGTTAAAGGGCCATGGTCTAAAGAGGAAGATGATGTGATGATTGAATTGGTGAACAAATATGGGCCTAAGAAGTGGTCAACTATCGCGCAACATTTACCTGGCCGTATTGGGAAGCAATGTCGAGAAAGGTGGCATAATCATCTTAATCCTGCTATAAATAAGGAAGCATGGACACAGGAAGAGGAGTTGGCTCTAATACGTGCTCATCAGATTTATGGGAACAAGTGGGCGGAATTAACGAAGTTTTTGCCTGGAAGGACAGACAATGCTATTAAAAACCACTGGAACAGTTCAGTCAAAAAGAAATTGGATTCTTACTTGGCATCAGGCTTGCTTACTCAATTGCAATCTGCACCTCATGTTGGAAATCCAAGTCAATCAATGGTTGCAACATCTTCAAGGTCGCAATGTAATGAAGATGATAATGTTCTTCAGCGGATTGAAGGAGATGAAGTTTTAGAGTGTAGTCATGAGATGACCGGTGTTGACTTGCAAACTGAAGGGGGGTATAGGCCAAATGAAGAATGTAGTCTTGGGACGGATCATAGTCCAAGTCAAGCATCCTGTTCAGAGCCATATCTTGTATCAATCGATGACTCAATTGACGATGTTACTATATGCATTCCAGAAATTGCTCACCATGATGCATGTTCTTCTGAATTCAATGAGCAATACTCACATGAACCTGGAAATTCCATAAATGAGGATGGCCACCTTAACTTACATTCCTTACCCAATAATTCATCAATGGACTTAGAGAAGGACTCCTTGCAGATGCAAAGAGAATGTACAGATCGTAGTGGAATACGTGACTTGGAGAATGTTCCATATCAGACTTCAGTGGGTTTAGCTGTTTCAACGCACATGGCAACTACATCTATTGATTCTGCTAAACCAGATCATATGTTGATATCTGATGACGAATGTTGCAGAGTTCTGTTTTCAGAGGCAAATAATGATAGATGTTTTATCCCTGGAGATTATAATAATGGTGTTGGTACTGTTGAATGTTCTGGTCACCCTGCATTTGTTTGTCAATCATGTCATATTCTGATTTTCGAAACTGGTGGAACCTCAATTCTGCCATTAGCTTGTCCTCAGTGTTCTAATAATTTCAAAGGAATGTCATCCTCCCAATCTAGCCGTCCAGTTCATTCTGCTGAGCCTGAGGATCAGCAGTTTGTCTCCGGAGCACCTGATAACTTAACTTATGCTAATGACATATCCAGTTCTCGTGTTGATACAGCAATGCAAGATGTTAAGCAAACCTGTTACCCAACATATGAAAATCCAAACATGCACACAGAAAAGGAGGGCGAGGGAGCACTATGTTATGAACCTCCCCGTTTTCCAAGCTTGGATATTCCTTTCTTGAGTTGCGATCTTGTACAATCTGGGGGTGATATGCAGCAAGAATTTAGTCCTCTTGGTATCCGCCAGTTTATGATGTCTTCTATGAACTGTATGACTCCGTCGAGGTTGTGGGACTCGCCTTCTCGCGCTGATAGTCCAGAAGCATTATTGAAAAGTGCAGCTAAAACTTTTACGGGTACACCATCAATATTAAAGAAGCGATGCCGAGATTTGTTTTCGCCACTTTCAGATAAAAGAATCGGTAAGAAACTTGAGACTGACTTGGCATCCTCTTTGTCCAAAGCTTTTTCTAGTTTGGAAGCAGATATACTTTCTCCATCTTCATTGCAAAAGAAAAACTCTGGGGCTTCTGGTTCTGACGACGATAAAGAAAATTGTGGACAAGCTGATAAAGGTAAACAAGTAGAGGAGATAATTAAATCTGCAATTTTGGAAGAAAAGAAGTCTAGAAGAGATGCTCTTGAAAGTAATTCTCCTGGTAAGGTTAAGCAGCAACCTTTTGATGTTGATTCTAAAATGAAGATTGATGCTGCTGCTGCTGCTGCTGAGATTGTGCAACAATCTTCTGGAGTTTTGTCTGAACATGATAGGAACGACCTTTCATTATATTCATCTGATCAAGTTGGTTTTAGAGACAGAGTTATAGGTTCTAGTGTTAGAACTCCCAGAAACTTGAACAATAGGAGGTCGGAAACAGCTCCAAACCAGAGCATCCCTTCAAAATTTTCTTCTGAGAATCAATGCAGGTTTAGCTCTCCTTGTGTTCGTGCAAAGGAGCATGAAAATCTTACAGTTTCAGTTAATCGTGTAAAAGCTCCAGGGGAAAATTCAGTGGATCAAAGTAAAAATGATGGAGGTTTTGAAACGTATAGCATATTTGGTGGAACACCTTTCAGGAAAGGTTTTGAATCACCTTCTGCATGGAAATCATCTCCTTGGTTCAGGAATACTTTTCTCTGTAGCCCCAATACTGAAATTAGAATTGAGGATTTTGGATTTTTCAAGAGCCCAGAAGGTGATAGAAGCTACGACGCTATCGGGTTGTTAAAAGAAGTCGGTGAACAAACTGCTGCTACATATGAAAATGCACAGGAGATTTTGAAAAATGATACTCCTAAAGCAGTACCTAAAGATGCACCTGAAAATAATAAGGATAGCAACCGGGAACTTAACAGTCCTAGGAATCAGCCTGCGAACAATTCTAAGTTGGCTTCAAATGCTTTGGTCGAGCGGCGTGTACTTGACTTTAGTGAATGTGGATCACCAGAAAAGGGTGATAGCAGCAAATCCACAGATAGTCAGCTATGA 2949 0.4106 MDGERKIAVPQVDGPIDSVEKVRAALHGRTTGPTRRSTKGQWTPEEDETLRKAVQHFQGKNWKKIAECFKDRTDVQCLHRWQKVLNPELVKGPWSKEEDDVMIELVNKYGPKKWSTIAQHLPGRIGKQCRERWHNHLNPAINKEAWTQEEELALIRAHQIYGNKWAELTKFLPGRTDNAIKNHWNSSVKKKLDSYLASGLLTQLQSAPHVGNPSQSMVATSSRSQCNEDDNVLQRIEGDEVLECSHEMTGVDLQTEGGYRPNEECSLGTDHSPSQASCSEPYLVSIDDSIDDVTICIPEIAHHDACSSEFNEQYSHEPGNSINEDGHLNLHSLPNNSSMDLEKDSLQMQRECTDRSGIRDLENVPYQTSVGLAVSTHMATTSIDSAKPDHMLISDDECCRVLFSEANNDRCFIPGDYNNGVGTVECSGHPAFVCQSCHILIFETGGTSILPLACPQCSNNFKGMSSSQSSRPVHSAEPEDQQFVSGAPDNLTYANDISSSRVDTAMQDVKQTCYPTYENPNMHTEKEGEGALCYEPPRFPSLDIPFLSCDLVQSGGDMQQEFSPLGIRQFMMSSMNCMTPSRLWDSPSRADSPEALLKSAAKTFTGTPSILKKRCRDLFSPLSDKRIGKKLETDLASSLSKAFSSLEADILSPSSLQKKNSGASGSDDDKENCGQADKGKQVEEIIKSAILEEKKSRRDALESNSPGKVKQQPFDVDSKMKIDAAAAAAEIVQQSSGVLSEHDRNDLSLYSSDQVGFRDRVIGSSVRTPRNLNNRRSETAPNQSIPSKFSSENQCRFSSPCVRAKEHENLTVSVNRVKAPGENSVDQSKNDGGFETYSIFGGTPFRKGFESPSAWKSSPWFRNTFLCSPNTEIRIEDFGFFKSPEGDRSYDAIGLLKEVGEQTAATYENAQEILKNDTPKAVPKDAPENNKDSNRELNSPRNQPANNSKLASNALVERRVLDFSECGSPEKGDSSKSTDSQL* 983
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5228 982 MobiDBLite consensus disorder prediction 654 679 - -
Mal1g5228 982 Gene3D - 144 209 - -
Mal1g5228 982 ProSiteProfiles Myb-like domain profile. 34 85 IPR001005 -
Mal1g5228 982 SUPERFAMILY Homeodomain-like 37 99 IPR009057 -
Mal1g5228 982 Gene3D - 91 142 - -
Mal1g5228 982 CDD SANT 42 85 IPR001005 -
Mal1g5228 982 ProSiteProfiles Myb-like domain profile. 86 137 IPR001005 -
Mal1g5228 982 SUPERFAMILY Homeodomain-like 88 184 IPR009057 -
Mal1g5228 982 MobiDBLite consensus disorder prediction 26 45 - -
Mal1g5228 982 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 142 192 IPR017930 -
Mal1g5228 982 PANTHER MYB PROTEIN-RELATED 6 464 - -
Mal1g5228 982 PANTHER MYB PROTEIN-RELATED 539 974 - -
Mal1g5228 982 MobiDBLite consensus disorder prediction 696 715 - -
Mal1g5228 982 MobiDBLite consensus disorder prediction 465 488 - -
Mal1g5228 982 MobiDBLite consensus disorder prediction 663 679 - -
Mal1g5228 982 CDD SANT 145 185 IPR001005 -
Mal1g5228 982 MobiDBLite consensus disorder prediction 914 982 - -
Mal1g5228 982 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 34 85 IPR017930 -
Mal1g5228 982 MobiDBLite consensus disorder prediction 767 793 - -
Mal1g5228 982 CDD SANT 93 137 IPR001005 -
Mal1g5228 982 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 86 141 IPR017930 -
Mal1g5228 982 PANTHER TRANSCRIPTION REPRESSOR MYB5 539 974 - -
Mal1g5228 982 PANTHER TRANSCRIPTION REPRESSOR MYB5 6 464 - -
Mal1g5228 982 MobiDBLite consensus disorder prediction 936 953 - -
Mal1g5228 982 ProSiteProfiles Myb-like domain profile. 138 188 IPR001005 -
Mal1g5228 982 MobiDBLite consensus disorder prediction 311 339 - -
Mal1g5228 982 Gene3D - 38 90 - -
Mal1g5228 982 SMART sant 142 190 IPR001005 -
Mal1g5228 982 SMART sant 38 87 IPR001005 -
Mal1g5228 982 SMART sant 90 139 IPR001005 -
Mal1g5228 982 Pfam Myb-like DNA-binding domain 91 137 IPR001005 -
Mal1g5228 982 Pfam Myb-like DNA-binding domain 39 85 IPR001005 -
Mal1g5228 982 Pfam Myb-like DNA-binding domain 143 185 IPR001005 -
Mal1g5228 982 MobiDBLite consensus disorder prediction 918 935 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5228 Mal-Chr1 125163390 125169254 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5228 4 972 MYB Transcription Factor Family AT4G32730 42.517 0.0 633
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mal1g5228 Myb_DNA-binding 3.3e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5228 - K09420 aprc:113848458 1264.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g5228 1 125163390 125169254 Mal1g5228 1 125163390 125169254 ECH