Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5220 ATGATCCCGCTATTGCTTCTCCTACTGCTTATCCATAAAGGAAGCAGCAGTATTGACGAGTGCAAAGAATCTTCATGTGGACAATACGAACCGATTGTTCGATTTCCCTTCCAACTTGTTAAGGAATCACAAGATGGATGTGTTTATCCTGAGTTTTGCTTCTACTGTACTCAAAATAAGAAAACCATGATGATGCTCTCTACCACTTCAGGTCCAATCAAATTCCTTGTCGTTTCCATAGACTACGAATCAAACCAAATTTCAGTGTACGACCCCGACAATTGCATTCCCGAAAAGTTTCTGAAACTTAACAATTCATCATTTCGGCCTTACGGATTTTCTTCGGAATCAATGACAACAGTATCCTTTTTCAATTGCTCTTCAGTTAGGAAACAACACCTGAGAAACCATGATCAGACATATCCCGGGTCACAAGATATGATCACTTGTCCAATTTACGTTTCTTATTCCGACGACAGTGTCCTCACATTGGACCTTGTATCGTGTACGAAGATGTTCGACATGGTACAAGGCCCGACGTATAATAGGCTCACATTAAGTTGGCCGAAACAAAATTGTACAAAGTGCGAAGATAAAGGTATGAAATGCAAATGGAAGAACAACGGAACAAAAGGCGAAACTGAATGTTTTTATTGCAACAAGAAACGAAAAACAATTCAAATTCCAAAATCTCTTATTTACGCTGCTTCAGGTTCAATTCTTTTGGCGCTGGTTCTCATCACATTATTTAAGATACATCTCTATTTTAGAAAAAAAGAAGAGGATCAAGTTAGAGTTGATAAGTTTTTAGAGGATTATAGAGCACAAAAGCCAGCTAGATTTTCCTATGCTGATATAAAAAGAATTACGAACGGGTTTAAGGAAAAACTTGGAGAAGGAGCTCACGGAACTGTATTTAAAGGAAAGCTCTCGAGTGAGATTCTTGTGGCGGTGAAAATGCTCAATGGTGCAGACGGAGAAGGGAAAGAATTCATCAATGAAGTGGGAATTATGGGCAAAATCCACCACATCAACGTAGTTCGTTTGCTTGGTTTTTGCGCAGATGGAATTCACTGTGCTCTTGTCTACAATTTGTTTCCAAATGGTTCGCTACAAAGCTTCATATTCCCACCGGATAACAAAGACCATTTCATGGGGTGGGAGAAGCTACAACAAATTGGTATTGGTATAGCGAAAGGAATTGAGTATCTTCATCTAGGTTGTAACCATCCAATCATTCACTTCGACATTAACCCCCACAATGTTTTGCTAGATGACTCCTTTACTCCAAAAATTTCGGATTTTGGTCTCGCCAAATTATGTTCCAAGAATCTTAATGTAGTGTCCATGACAGCTGCTAAGGGAACTTTGGGATATATGGCGCCTGAAGTTCTATCAAGAAATTTTGGAAATGTGTCTCTTAAATCAGATATTTACAGTTATGGAATGTTGTTGCTAGAAATGGTTGGCGGAAGAAAAAATGTAGACATGTCATCTGCAGAAACTTTTCATGTGTTATACCCAGACTGGATCCATAACTTATTGGAAGGAGATGAACATATTCATATTGAGGATGAATGTGATGTTAAAATTGCAAAGAAACTTGCAATTGTTGGACTTTGGTGCATTCAATGGCAACCAATAAATCGGCCATCGATAAAAAATGTTGTGCAAATGTTGGAAACCGAAGAGGATATCCAGTTAATTGTGCCTCCTAATCCTTTTCACTCGATGACTTCCATTACCACTAATGATCAATGCACTTTGGCAAGAAGAACTTTCCAAATGGAAGTGATTCAAGAATAA 1806 0.3843 MIPLLLLLLLIHKGSSSIDECKESSCGQYEPIVRFPFQLVKESQDGCVYPEFCFYCTQNKKTMMMLSTTSGPIKFLVVSIDYESNQISVYDPDNCIPEKFLKLNNSSFRPYGFSSESMTTVSFFNCSSVRKQHLRNHDQTYPGSQDMITCPIYVSYSDDSVLTLDLVSCTKMFDMVQGPTYNRLTLSWPKQNCTKCEDKGMKCKWKNNGTKGETECFYCNKKRKTIQIPKSLIYAASGSILLALVLITLFKIHLYFRKKEEDQVRVDKFLEDYRAQKPARFSYADIKRITNGFKEKLGEGAHGTVFKGKLSSEILVAVKMLNGADGEGKEFINEVGIMGKIHHINVVRLLGFCADGIHCALVYNLFPNGSLQSFIFPPDNKDHFMGWEKLQQIGIGIAKGIEYLHLGCNHPIIHFDINPHNVLLDDSFTPKISDFGLAKLCSKNLNVVSMTAAKGTLGYMAPEVLSRNFGNVSLKSDIYSYGMLLLEMVGGRKNVDMSSAETFHVLYPDWIHNLLEGDEHIHIEDECDVKIAKKLAIVGLWCIQWQPINRPSIKNVVQMLETEEDIQLIVPPNPFHSMTSITTNDQCTLARRTFQMEVIQE* 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5220 601 PANTHER RECEPTOR-LIKE KINASE 11 601 - -
Mal1g5220 601 ProSiteProfiles Protein kinase domain profile. 291 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g5220 601 Gene3D Phosphorylase Kinase; domain 1 264 365 - -
Mal1g5220 601 SUPERFAMILY Protein kinase-like (PK-like) 274 561 IPR011009 -
Mal1g5220 601 PANTHER RUST RESISTANCE KINASE LR10-RELATED 11 601 IPR045874 GO:0004672
Mal1g5220 601 Gene3D Transferase(Phosphotransferase) domain 1 366 570 - -
Mal1g5220 601 ProSitePatterns Protein kinases ATP-binding region signature. 297 319 IPR017441 GO:0005524
Mal1g5220 601 Pfam Wall-associated receptor kinase galacturonan-binding 21 91 IPR025287 GO:0030247
Mal1g5220 601 Pfam Protein tyrosine and serine/threonine kinase 293 560 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5220 Mal-Chr1 125069381 125071274 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5220 25 574 Receptor kinase-like Gene Family AT1G66910 32.397 6.00e-95 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mal1g5220 PK_Tyr_Ser-Thr 2.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5220 - - gmx:100811907 842.802