Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5219 ATGACCCAATTCATTGTGGGGACAGCAGAGGAGGAAAGAAAAACTTGCAAAGATCCATACCAAGCCGCTGTACGAGATCGCGATGAGCTTCTTTTTGAGCATATAGTTTACTTGAATTGCAGCCATCAAGTGATTAACAATTCTAAATATGTGAATACTTCTTCCTGCGTTAATCGGCACTCCAATAAAAACTATTATATTTATGCTATGGCTGGTGATTTAATTGCTCAAGATTTTCAAGTTGGTTGTTATGTGACATTGGTTTCTCCAACTTCTTGGTCTGGTTTGCAAAGAAATCATCAAGTACTTTCCTATGATGTTATGCACAAAGCATTAGTCTATGGATTTGAGATTTCATGGTTGGATCTTCACTGTCAGAATCTTTGCGGAGATTCAGATTACTGTTACTTCAACGCTACCACTGAGAAACTTCTATGCGGTCGCTACTGTCATAGTTTCTGGGGAGATCGGAGCCCGCTTTATTGTGGGATATGGTATCAGCTGCGTTTATACGCTAAAGATATTACCATCGCTATTTGGATAGGATTAGTTGCAATAATAAAAGGACGAAACCAAAATTACGAAGGTTATACGGAGTATAAAATAGGACTACGCACAGGACAGTACGTTTTACCATCATTCTTGGCGGCTAGATATTTGTTTGGGATGACATTATTTATTGCCTTGTTGATATACAAATGGAGGAAAAGGCATTTGTCAATGTTTGAATATATTGAAATATATCTACAACAAGAAAACAATCTCATGCCCATTGGATATTCATACAAAGAAATTAAGAAAATGGCTAGAGGTTTCAAAGACAAATTGGGTGAAGGAGGTTTTGGCACTGTGTTTAAGGGGAACCTACGTAGTGGGCCATGTGTTGCAATCAAGATGTTGGGTAAGTCAAAAGGTAATGGACAAGACTTTATTAGTGAAGTAGCAACCATTGGAAGAATACATCATTTGAATGTGGTTCAATTAATTGGGTTTTGTGCTGAGGGATCAAAACGTGCTCTTGTTTATGAATTCATGCCTAATGGATCCCTAGATAAATTTATTTTCTCGAAAGAAGGAAGCGTAAATATAAGGTATAGTCAAATTTTTGATATATCGGTTGGAGTAGCTCGTGGGATTGCTTATCTCCACCATGGATGTGAAATGAAGATTTTGCATTTTGATATCAAGCCTCACAACATCCTTCTTGATGAGAATTTCACTCCAAAAGTCTCTGACTTTGGACTGGCTAAACTATATCCTTTAGAGAATAGCATTGTCACGATGACTGCAGCAAGAGGTACAATTGGATATATGGCTCCAGAATTGTTCTATAAAAATATTGGGGGAGTGTCCTATAAGGCTGATGTTTATAGCTTTGGGATGCTTTTGATGGAGATGGCAAGTAATAGGAAAAACCTAAATGCTCAAGCAGAACATTCAAGCCAGCTTTACTTTCCCTTATGGATTTATGATCAATTTGGACAAGAGGGAGAAATAGAAATAGAAGATGTCACAGAGGAGGAAATGAAAATAGTAAAGAAGATGATCATAGTCGCACTTTGGTGTATACAATTGAAACCAGATGATCGCCCCACAATGAGCAAAGTAGTGGAGATGCTTGAAGGAGATGTTGATAGCCTTGAAATGCCTCCAAAGCCAACCCTTTATCCGCATGAAACGGTTGTAGACGATCAAAGAACCAACTATGACCAAACAATGTCGAGTGATGGCTATACAAGTTCTTATGACTCTATGGAAAGAGAAACTAATTCTCTGATAGAGAATATTGCTTGA 1794 0.3785 MTQFIVGTAEEERKTCKDPYQAAVRDRDELLFEHIVYLNCSHQVINNSKYVNTSSCVNRHSNKNYYIYAMAGDLIAQDFQVGCYVTLVSPTSWSGLQRNHQVLSYDVMHKALVYGFEISWLDLHCQNLCGDSDYCYFNATTEKLLCGRYCHSFWGDRSPLYCGIWYQLRLYAKDITIAIWIGLVAIIKGRNQNYEGYTEYKIGLRTGQYVLPSFLAARYLFGMTLFIALLIYKWRKRHLSMFEYIEIYLQQENNLMPIGYSYKEIKKMARGFKDKLGEGGFGTVFKGNLRSGPCVAIKMLGKSKGNGQDFISEVATIGRIHHLNVVQLIGFCAEGSKRALVYEFMPNGSLDKFIFSKEGSVNIRYSQIFDISVGVARGIAYLHHGCEMKILHFDIKPHNILLDENFTPKVSDFGLAKLYPLENSIVTMTAARGTIGYMAPELFYKNIGGVSYKADVYSFGMLLMEMASNRKNLNAQAEHSSQLYFPLWIYDQFGQEGEIEIEDVTEEEMKIVKKMIIVALWCIQLKPDDRPTMSKVVEMLEGDVDSLEMPPKPTLYPHETVVDDQRTNYDQTMSSDGYTSSYDSMERETNSLIENIA* 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5219 597 PANTHER RUST RESISTANCE KINASE LR10-RELATED 29 570 IPR045874 GO:0004672
Mal1g5219 597 ProSiteProfiles Protein kinase domain profile. 270 555 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g5219 597 Coils Coil 582 597 - -
Mal1g5219 597 Pfam Protein kinase domain 273 538 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g5219 597 Gene3D Phosphorylase Kinase; domain 1 248 344 - -
Mal1g5219 597 Gene3D Transferase(Phosphotransferase) domain 1 345 555 - -
Mal1g5219 597 SUPERFAMILY Protein kinase-like (PK-like) 251 541 IPR011009 -
Mal1g5219 597 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 29 570 - -
Mal1g5219 597 ProSitePatterns Serine/Threonine protein kinases active-site signature. 390 402 IPR008271 GO:0004672|GO:0006468
Mal1g5219 597 SMART serkin_6 270 540 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g5219 597 ProSitePatterns Protein kinases ATP-binding region signature. 276 298 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5219 Mal-Chr1 125047398 125068184 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5219 260 572 Receptor kinase-like Gene Family AT5G38280 51.411 8.89e-111 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mal1g5219 Pkinase 1.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5219 - - mtr:MTR_1g027440 793.497