Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5213 ATGATGCCAATCCATGCACTGCTACTGCTATTGCTATTGCTGCTGCTTATAAGCTTTGTAAATTGTCAGAATAATAATAATAGCTCCTCCATTGAATGCCCCTTCCGTTTATCTTGTTCAAGTAACAAGAAACAATACCTTGAGTTTCCCTCAAAACCAGTATCAAAAAAATTCCTTATCAAAGACATAGATTGCAAATTGAAACAATTAGTGCTATCTGACCCAAAAAACTGTCTTTCTAATGTCTTTTTAACCAACAATTTTTCATTATTTTATCCTTTCCAATCAAATAATTATTGGCAATCCAGCTACAACATTATTACTTTCTTTAATTGCTCTTCAGTTGGAGAACACCATCTCAAAAGCTGGGATCAAAGAAACCCTGGAGTACAAGACATGTTGTCTTGTCCGATTTATGCTACTGATTCCTACGAAAGTGTCGTTGAATTGGACTTATTAAGCTGCACAAGAATGTTTGATAAAGTTTTGCCAGTATCAGCAAATTATGATATAAGGTATAACTCACTCAGCTTGAATTGGTCCGAAAGAACTTTTCCTAGTCGATGTTTAGAATATGATCAGCTACACAAAAAATCAAAGAAGAACCACACATCCCTTATTTTAGCAACAACAGGAGCAATTGTTGGTTCAACTATGCTGGTTGTTTTGATTGGTGTTTTCTTTCGAGTGTACGTCTTTTATAAGACGAAAGGGGAAGATCAAACTAGACTTGAAAACTTTTTGAAGGATTATGAAGCTTCAAAGCCAACTAGATTCTCTTATTCTGATATCAAGAGAATTACAGATCATTTCAAGGAAAAGCTAGGCGAAGGAGCTCATGGAGCTGTCTATAAAGGTAAATTATCGAGTCAAATTCTGGTTGCTGTGAAGATGCTTAGTAATACAGAAGGAGATGGAAGAGAGTTCATAAATGAAGTGGGAACTATGGGAAAAATCCATCATGTTAATGTTGTTCGGTTGCTTGGCTTCTGCGCCGATGGATTTTATCGTGCTTTGGTTTATGACTTTTTCCCGAATGGTTCGTTGCAAAATTTCATTTCTTCACCCGACAACAAAGATGTTTTCCTTGGGTGGGACTTATTGCAACAAATTGCTCTAGGCATTGCCAATGGGATTGAGTATCTTCACCAAGGTTGTGATCATAGAATTCTTCACTTCGATATCAATCCACACAATGTATTATTAGATGACAATTTCGTTCCAAAAATATCAGACTTCGGTTTAGCTAAGTTGTGCTCCAAAAATAAAAGTACAGTATCAATGACTGCAGCTAGGGGAACATTAGGTTACATGGCACCTGAAGTTTTTTCTAGAAACTTCGGAAATGTCTCTTATAAGTCTGATATATACAGCTACGGTATGTTGTTGCTAGAAATGGTTGGAGGAAGAAAGAACACTAAGACGACCATAGGTGAAGAAAATTTCCAAGTTCTGTATCCAGATTGGATCCACGGTTTATTTGAAGGGGGAGACATATATATCCCAATCGATGAAGAAGGAGATTTTAGAATTGCAAAGAAACTTGCAATTGTCGGACTTTGGTGCATTCAGTGGCACTCTGTGCATCGACCGTCTATGAAAACTGTGGTTCAAATGCTTCAAGGAGAGGGAGACAAATTAAAAGTTCCTACCAATCCATTCAATGTGTCATCATCAACTAATAGAACTGTAAATGCTGTTGCAGGATGTTTGAATTTAGAACTAGATGTCATTCAAGAATTAGAGTAA 1749 0.3665 MMPIHALLLLLLLLLLISFVNCQNNNNSSSIECPFRLSCSSNKKQYLEFPSKPVSKKFLIKDIDCKLKQLVLSDPKNCLSNVFLTNNFSLFYPFQSNNYWQSSYNIITFFNCSSVGEHHLKSWDQRNPGVQDMLSCPIYATDSYESVVELDLLSCTRMFDKVLPVSANYDIRYNSLSLNWSERTFPSRCLEYDQLHKKSKKNHTSLILATTGAIVGSTMLVVLIGVFFRVYVFYKTKGEDQTRLENFLKDYEASKPTRFSYSDIKRITDHFKEKLGEGAHGAVYKGKLSSQILVAVKMLSNTEGDGREFINEVGTMGKIHHVNVVRLLGFCADGFYRALVYDFFPNGSLQNFISSPDNKDVFLGWDLLQQIALGIANGIEYLHQGCDHRILHFDINPHNVLLDDNFVPKISDFGLAKLCSKNKSTVSMTAARGTLGYMAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNTKTTIGEENFQVLYPDWIHGLFEGGDIYIPIDEEGDFRIAKKLAIVGLWCIQWHSVHRPSMKTVVQMLQGEGDKLKVPTNPFNVSSSTNRTVNAVAGCLNLELDVIQELE* 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5213 582 SUPERFAMILY Protein kinase-like (PK-like) 250 540 IPR011009 -
Mal1g5213 582 ProSiteProfiles Protein kinase domain profile. 269 555 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g5213 582 Pfam Protein tyrosine and serine/threonine kinase 271 477 IPR001245 GO:0004672|GO:0006468
Mal1g5213 582 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 21 582 - -
Mal1g5213 582 Gene3D Phosphorylase Kinase; domain 1 243 343 - -
Mal1g5213 582 Gene3D Transferase(Phosphotransferase) domain 1 344 555 - -
Mal1g5213 582 ProSitePatterns Protein kinases ATP-binding region signature. 275 297 IPR017441 GO:0005524
Mal1g5213 582 PANTHER RUST RESISTANCE KINASE LR10-RELATED 21 582 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5213 Mal-Chr1 124963377 124965221 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5213 195 553 Receptor kinase-like Gene Family AT1G66910 45.479 1.10e-97 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mal1g5213 PK_Tyr_Ser-Thr 1.7e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5213 - - adu:110273083 671.389