Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5212 ATGAACCGAGAGAAACTCTTCTCCTTCTATGTGGAATCAATGTTATACTTCCTCCAAATATTCATGGTTCTTATGCTCCTAATGCATCATCAAACATGCGATGCAATTACAAATGGTAATAACCAAACATATTGTCCACCTTCTTCATGTGGCAAAATCACAAACATAAAACATCCATTCCGACTTAAGAATGATCCAACAAACTGTGGTGATCCGAGGTACGAGTTATCCTGCGAAAACAACATCACAACCTTAACTTTGTTCTCGGGTAAATACTACGTGAAATCAATCAACTACAACAACTACACAATTAGAGTAGTTGATCCCGGAATTGAAGAGGGTGATTGCCCCACCATTATTCCTCACTATTACTTATACAATTTCAATTTCACGAGCTCTTACAATTATGAATACCGCGCTGTTGATCCATATCAAACTTGGCAGAGAAGAATAATTGATAGAACTAAATATGATACTTACTTTGATACTAGTTCATTATCAATGTTCCAGCATGTAACTTACATGAATTGTAGCAATCCTGTGACGGATGATCCAGTTTACGTGGATACAGCTTCTTGCATGATCAAGTCGAATTCACAAAGTGGCCATGTTTATGCAATTGCTGGGGATTTGAAGGTTAAAAACTATAATCATGATGAATGTCGCGTGGAGGTTGTTACGCCTATATCTTTTTTCCGTTATAATTACAGCTCTGAGGATTGGGATACTCCCGATGGAAAATTTTCGTACATTGATGCAATTTATGTACGTGAACGGGATATTCCTAGTCCAATATTTGATTACAGTGAAATTCAAAGGATGTTGAAGGGTGGATTTGAAGTTTCTTGGATGACTAGTCCTTGTGAAGATATTTGTGGAGTCCCAGATTGCTATTTGAGAGAAACCACTTGGAATCTTGAATGCAACGATCCGTCTAGTCCATGTATAACAACATTGGGATTTCATGTCGCTTGTGACGGACATCCATCGAAGCTGCGAATGTTTGTCGAAGGTATTACGTACGGAATTGCCAGAGGACTACTACATGCAATAGGTGTGAGAATATACGATGGATCTCAGGGTGTTTCTGAATCTCAACTTGGTATTGACATAGGAAGAATAATTGGAAGGTATATTTTGTCATCATACATTGTAGTTAGATTAATGTTGGGTCTCATAGCTCTCTTTGGAAAATTCATACATACATATCGAACAAGGCATACATCAATGTATGAAAACATCGAAGATTTTCTTCAAGGGAATTCCCTCATGCCAATAAGGTATTCATACAAAGAGATAAAGAAGATGACTAGAGGTTTTAAGGAAAAGTTGGGTGAAGGAGGATATGGTACGGTTTATAAGGGAAAACTTCGCAGTGGACCTTTGGTAGCCATAAAGATGTTGGGCAAACTTAAGGGTAATGCAAATGGACAAGATTTCATTAGTGAAGTTGCAACTATAGGAAAAATACATCACACCAATGTGGTGCGACTTATTGGATTTTGTGTTGAGGGATCAAAACGTGCTCTTGTTTATGATTTTATGCCCAATGGCTCTCTCGATAGATATATTTCCTCTAGAGAAGATCATATTTTCTTAACTTATAAGCAAATGTACGAGATATCTCTTGGAGTGGCGCGTGGAATTGCTTATTTGCATCAAGGTTGTGACATGCAAATTTTACATTTTGATATCAAACCCCATAACATACTTCTTGACCAGGACTTCGTCGCCAAAGTTTCAGACTTTGGTCTCGCAAAACTTTATCCAGTTGACAATAGCATTGTAACTTTGACTGCTGCAAGAGGAACAATAGGTTACATGGCTCCAGAATTGTTCTACAAAAACATTGGTGGAGTTTCTTATAAGGCCGATGTATATAGTTTTGGAATGCTGCTAATGGAAATAGCAAATAGAAGAAGAAATTTGAACTCAAATGCAGATGATTCAAACCAAATTTTCTTTCCCTATTGGATTTACAATGAATTGGTTGAAGAAAGGGAGATAGAAATATTGGGAGAAGCTACCAATGAAGAAAAGAAAAATGTGAAGAAGATGTTCATAATTGCTCTATGGTGTATACAATTGAATCCTAGTGATCGTCCTTCAATGGACAGAGTAATAGAAATGCTTGAAGGAGATATTGAAGACATTGAAATTCCTCCAAAACCTTCTCCATATCCAACGGATATTATTCAAGATAATGGAGTTAGCTCTAATGAATCTTTATCGGATGATGATGTCACTGGTTCAATTAGTTTTCTTGAGGAAACTATAGAAGATCCTCTACTATAG 2295 0.3695 MNREKLFSFYVESMLYFLQIFMVLMLLMHHQTCDAITNGNNQTYCPPSSCGKITNIKHPFRLKNDPTNCGDPRYELSCENNITTLTLFSGKYYVKSINYNNYTIRVVDPGIEEGDCPTIIPHYYLYNFNFTSSYNYEYRAVDPYQTWQRRIIDRTKYDTYFDTSSLSMFQHVTYMNCSNPVTDDPVYVDTASCMIKSNSQSGHVYAIAGDLKVKNYNHDECRVEVVTPISFFRYNYSSEDWDTPDGKFSYIDAIYVRERDIPSPIFDYSEIQRMLKGGFEVSWMTSPCEDICGVPDCYLRETTWNLECNDPSSPCITTLGFHVACDGHPSKLRMFVEGITYGIARGLLHAIGVRIYDGSQGVSESQLGIDIGRIIGRYILSSYIVVRLMLGLIALFGKFIHTYRTRHTSMYENIEDFLQGNSLMPIRYSYKEIKKMTRGFKEKLGEGGYGTVYKGKLRSGPLVAIKMLGKLKGNANGQDFISEVATIGKIHHTNVVRLIGFCVEGSKRALVYDFMPNGSLDRYISSREDHIFLTYKQMYEISLGVARGIAYLHQGCDMQILHFDIKPHNILLDQDFVAKVSDFGLAKLYPVDNSIVTLTAARGTIGYMAPELFYKNIGGVSYKADVYSFGMLLMEIANRRRNLNSNADDSNQIFFPYWIYNELVEEREIEILGEATNEEKKNVKKMFIIALWCIQLNPSDRPSMDRVIEMLEGDIEDIEIPPKPSPYPTDIIQDNGVSSNESLSDDDVTGSISFLEETIEDPLL* 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5212 764 MobiDBLite consensus disorder prediction 731 747 - -
Mal1g5212 764 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 12 737 - -
Mal1g5212 764 CDD STKc_IRAK 444 713 - -
Mal1g5212 764 ProSitePatterns Protein kinases ATP-binding region signature. 444 466 IPR017441 GO:0005524
Mal1g5212 764 Pfam Wall-associated receptor kinase galacturonan-binding 45 108 IPR025287 GO:0030247
Mal1g5212 764 SUPERFAMILY Protein kinase-like (PK-like) 423 712 IPR011009 -
Mal1g5212 764 MobiDBLite consensus disorder prediction 720 747 - -
Mal1g5212 764 Gene3D Phosphorylase Kinase; domain 1 415 514 - -
Mal1g5212 764 SMART serkin_6 438 711 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g5212 764 ProSiteProfiles Protein kinase domain profile. 438 715 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g5212 764 Pfam Protein kinase domain 441 709 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g5212 764 PANTHER RUST RESISTANCE KINASE LR10-RELATED 12 737 IPR045874 GO:0004672
Mal1g5212 764 ProSitePatterns Serine/Threonine protein kinases active-site signature. 560 572 IPR008271 GO:0004672|GO:0006468
Mal1g5212 764 Gene3D Transferase(Phosphotransferase) domain 1 515 723 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5212 Mal-Chr1 124941916 124962091 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5212 381 724 Receptor kinase-like Gene Family AT4G18250 46.591 2.44e-101 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mal1g5212 Pkinase 4.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5212 - - mtr:MTR_1g027050 1290.02