Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5210 ATGTGCAGAGCAAAACCATTCATATGTTTCCTCAAAATTATGCTTGTTGTGCTATTGCATCATGATCAAACATGTGATGCAGAAAATAGTAAAAACAAAACTTGTCCCCCTTCTTCATGTGGCAAAATCAACAACATAAAATATCCCTTCAGACTTAAGAATGATCCAGCAACCTGCGGTGATCCAAGGTACGAGTTATCATGCGAAAATAACATCACAACATTAACTCTTTTTTCGGGTAAATACTATGTGAAATCAATCAACTACAACAACTACACAATCAGACTAGTTGATCCCGGAATTCAAGAAGGTGATTGCTCATCCATTCCTCGGAATTTTCTAACCTCATCAAATTTCACTAGTTCTTACGATTATAACTACCACGGGGATCCATATCAAACCTTCCAGTATAGAATACCTGATGGTGGAACATTACCAATGTTCCACCACGTAGTTTATATGAATTGCAGCAATCCTATACGGGATGATCCAGCGTACACGGATGCAGCTTCTTGCATGATCAACTCAAATTCCCAAGGTGGCAATGTTTATGCCATTGTTGGGGATTTGAAAGTTGGAAACTTAAAACATGATGATTGCCATGTGGAGATTGTTACCATGATATCTTTTTTCGGTTATTATCGTAGTGCACATGAACGGAACACTTTCTATCAGAAGTTTTCGTACAGTGAAATTCATAGGATGTTGGTGGATGGATTTGAGGTTGCATGGATGAGTGGTCCTTGTGAAGATCTTTGTGGAGAACCATCTTGCAGTTTGAAGGAAGCCACTTGGACGCTTAAATGCAACGATCATGGTGATTACTGTATAACCACCATGGGATTTCATGTTGGTTGTGGACCTCCATCAAAGCTGCGAATGCTTGTCGAAGGTATTATGTTTGGCATTGCTAGAGGACTAATGCAAGCATTTGGTGCGACAATATACAATGGATCAAGGGGCATTTCTCAATCTAAACTTGGTATTGACATAGGAACAATCATTGGAAAATATGTTTTGGCCCCGTACATTTTAGTGAGACTCACGTTGGGTCTTGTAGTTTTCTTTGCAAAATTGATACATAAATATAAAATAAGGCATACATCAATGTATGAAAACATCGAAGATTTTCTTCAAGGGAACTCCCTCATGCCAATAAGGTATTCATACAAAGAGATAAAGAAAATGACTAGAGATTTTAAGGACAAGTTAGGTGAAGGAGGATATGGTAAGGTTTATAAGGGAAAGCTACGCAGTGGGCCTTTGGTAGCCATAAAGATGTTGGGTAAACGTAAGGGTAACGGAAATGGGCAAGATTTCATTAGTGAAGTTGCAACTATAGGAAGAATACACCATACCAATGTGGTGCGACTTATTGGATTTTGTGTTGAGGGATCAAAACGTGCTCTTGTTTATGATTTCATGCCCAATGGCTCTCTTGATAGATATATTTCATCTAGAGAAGATCATATTTCCTTAACTTATAAACAAATGTATGAGATATCTCTTGCAGTGGCCCGTGGAATTGCTTATTTGCATCAAGGTTGTGACATGCAAATTTTACATTTTGATATCAAGCCCCATAACATACTTCTTGACAAGGACTTCATCGCCAAGGTTTCTGACTTTGGTCTTGCAAAACTTTATCCTGTTGACAATAGTATTGTAACTTTGACCGCTGCAAGAGGAACAATTGGTTACATAGCTCCAGAATTGTTCTACAAAAATATTGGTAAAGTTTCCTATAAGGCTGATGTGTATAGCTTTGGAATGCTCTTAATGGAAATAGCAAATAGGAGAAGAAATTTGAACTCACATGCTGATGATTCTAGCCAAATTTTCTTTCCCTATTGGATTTACAATGAATTGATTGAAGAAAGGGAGATAGAAATATTGGGAGAAGTTACGGATGAGGAAAAGAAAAATGTGAAGAAGATGTTTATAGTTGCTCTATGGTGTATACAATTGAACCCCAATGATCGTCCTTCAATGGACAAAGTAATAAAAATGCTTGAAGGAGATACTAAAGACGTTAAAATTCCTCCAAAACCTTCTCCATATCCAACTGAGATTAAAGATCATGGAGTTAGCTCTAGTGAATCTTTATCGAATGATGCTGTCACTGGCTCAATTAGTTTTCTTGAGGAAACTATTGAGGATCCTTTACTATAG 2172 0.3748 MCRAKPFICFLKIMLVVLLHHDQTCDAENSKNKTCPPSSCGKINNIKYPFRLKNDPATCGDPRYELSCENNITTLTLFSGKYYVKSINYNNYTIRLVDPGIQEGDCSSIPRNFLTSSNFTSSYDYNYHGDPYQTFQYRIPDGGTLPMFHHVVYMNCSNPIRDDPAYTDAASCMINSNSQGGNVYAIVGDLKVGNLKHDDCHVEIVTMISFFGYYRSAHERNTFYQKFSYSEIHRMLVDGFEVAWMSGPCEDLCGEPSCSLKEATWTLKCNDHGDYCITTMGFHVGCGPPSKLRMLVEGIMFGIARGLMQAFGATIYNGSRGISQSKLGIDIGTIIGKYVLAPYILVRLTLGLVVFFAKLIHKYKIRHTSMYENIEDFLQGNSLMPIRYSYKEIKKMTRDFKDKLGEGGYGKVYKGKLRSGPLVAIKMLGKRKGNGNGQDFISEVATIGRIHHTNVVRLIGFCVEGSKRALVYDFMPNGSLDRYISSREDHISLTYKQMYEISLAVARGIAYLHQGCDMQILHFDIKPHNILLDKDFIAKVSDFGLAKLYPVDNSIVTLTAARGTIGYIAPELFYKNIGKVSYKADVYSFGMLLMEIANRRRNLNSHADDSSQIFFPYWIYNELIEEREIEILGEVTDEEKKNVKKMFIVALWCIQLNPNDRPSMDKVIKMLEGDTKDVKIPPKPSPYPTEIKDHGVSSSESLSNDAVTGSISFLEETIEDPLL* 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5210 723 MobiDBLite consensus disorder prediction 678 703 - -
Mal1g5210 723 Pfam Protein kinase domain 401 669 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g5210 723 Pfam Wall-associated receptor kinase galacturonan-binding 35 98 IPR025287 GO:0030247
Mal1g5210 723 ProSitePatterns Protein kinases ATP-binding region signature. 404 426 IPR017441 GO:0005524
Mal1g5210 723 ProSitePatterns Serine/Threonine protein kinases active-site signature. 520 532 IPR008271 GO:0004672|GO:0006468
Mal1g5210 723 SMART serkin_6 398 671 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g5210 723 SUPERFAMILY Protein kinase-like (PK-like) 383 672 IPR011009 -
Mal1g5210 723 Gene3D Phosphorylase Kinase; domain 1 375 474 - -
Mal1g5210 723 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 11 701 - -
Mal1g5210 723 ProSiteProfiles Protein kinase domain profile. 398 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g5210 723 PANTHER RUST RESISTANCE KINASE LR10-RELATED 11 701 IPR045874 GO:0004672
Mal1g5210 723 Gene3D Transferase(Phosphotransferase) domain 1 475 681 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5210 Mal-Chr1 124922620 124934237 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5210 29 685 Receptor kinase-like Gene Family AT5G38260 34.375 3.20e-105 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mal1g5210 Pkinase 1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5210 - - mtr:MTR_1g027050 1117.83