Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5195 ATGATATTATTGGTCTTGTTCCAATTTATGCTTCTACTTCACCAAGGTAGCAGCACTAATCTTTCTATTGAGAAAAAACATTCTTGTCCCCCATCATCTTGTGGCAAAATTTCCAACATTACTTACCCATTTCGACTAAAAGATGATCCAATTCATTGCGGGGACAAAAGGTACGAATTATCTTGTGAAAATAACGTGACAATTTTAAATTTGTATTCCGGAAAATATTATGTGAAGAACATCAACTACAACAATTTCACAATCCGAGTTGTTGATCCTGGAGTTCAAAAAGATAATTGTTCTTCACTTCCTCGCTATTTTTTGTCTCAATCTAATTTCTGTGATACTTATCAAGAGGAGGAAAAACCTTGCAAGGATCCATTCCAAGCTCAAGGATCTACTTATGACTTTGAACTTTTTAAGCATATAGTTTACATGAATTGTAGCCATCCAGTGACTAATAATCCTAAATATGTCAATACTTCTTCCTGTCTCAATTGGAACTCCAAATCCAAAGGCTATTATATTTATGCTATTGCTGGTGATTTAATTGTTGAAGACTTTCAAGTTGGTTGTCATGTGCAATTGGTTACTCCAACTTCTTGGAAGGGTTTACATAGAAATCAAGTTTTTTCCGATTATGGCACTCCAATGGAGTTAGTCTTTCCAAGAAATAAAGTTTTTTCCTATGATGTCATTCATAAGGCGTTAGTATATGGATTTGATATTTCATGGATGAATCTAATTTGTCAAAATCGTTGCGGAGATACAAGACTATGCTCCTTCAACAGTTCCGGAGAGATATTTCAATGCTATATTCCCTACTGCTTTACTATGATGGGATATTGGAAAACTAGTAGTTGTGATACATTGACTCAGATTACTTCATATGCTAAAGATACTATCAAGGCTATCTGGAAAGGACTTGTTGAAATAATAAAAGGACCAAACTCAAACTATGATGGTATTACCAAATATAAAGTAGGATTGGCCATAGGACACTATATTCTACCATCATTCTGGGCTGCTAGAATTCTGTTTGGAATAACATTTTTTATCGCACTACTGATATACAAATGGCGAAAAAGACATTGGTCAATGTATGAATGTATTGAAATATATCTACAGCAGCAAAATAACCTCATGCCTATTGGATATTCATACAAAGAAATTAAGAAAATGGCTAGAGGTTTCAAAGATGAATTGGGTAAAGGAGGCTTTGGTACTGTGTTCAAGGGAAACCTACGTAGTGGACCTTGTGTGGCAATCAAGATGTTGGGCAAGTCAAAAGGTAATGGGCAAGACTTTGTCAATGAAGTCACAACTATTGGAAGAATACATCATTTAAATGTTGTTCAATTACTTGGATTTTGTATTGAGGGATCAAAACGAGCTCTTGTTTATGAATTCATGCCCAATGGATCTCTTGATAAATATATTTTCTCTAAAGAAGGAAGTATAAATTTGAGCTATAATCAATTGCACGATATTTCAATTGGAATAGCTCGTGGGATTGCTTATCTCCACCATGGATGTGAGATGAAGATTTTGCATTTTGATATCAACCCCCACAATATCCTGCTTGACGAGAACTTTATCCCAAAGATATCTGATTTTGGACTCGCAAAGCTATATTCAGTACAGAATAGCATTGTCACAATGACTGCAGCAAAAGGCACGATTGGATATATGGCTCCAGAATTGTTTTACAAAAATATTGGGGGAGTGTCCTATAAGGCTGATGTTTATAGCTTTGGGATGCTTTTGATGGAAATGGCAAGTAAGAGGAAAAATTTGAACACCCATGCAGAGCATTCAAGTCAGCTGTATTTTCCTTTTTGGATTCATGGTCAACTTGTAAAAGAGGGAGAGATAGAAATGGAAGATATCACTGAGGAAGATATGAAAATAGTAAAAAAGATGATAATAGTCGCTCTTTGGTGTATACAATTTAAGCCGAATGATCGCCCCTCAATGAGTAAAGTAGTGGAAATGCTTGAAGGAGACATTGAAAGTCTTGAAATACCTCCAGAGCCAACCATGTATCCAGATGAAACGATTTCAGCGGACGAAACAACCACCTCAGATCAAACAATATCCAGTGACTTCACTAGCTCTAGTGATTCTGGGGAAAACATAACTAATCCTCTGCTAGAGAATATTTCTTGA 2169 0.3568 MILLVLFQFMLLLHQGSSTNLSIEKKHSCPPSSCGKISNITYPFRLKDDPIHCGDKRYELSCENNVTILNLYSGKYYVKNINYNNFTIRVVDPGVQKDNCSSLPRYFLSQSNFCDTYQEEEKPCKDPFQAQGSTYDFELFKHIVYMNCSHPVTNNPKYVNTSSCLNWNSKSKGYYIYAIAGDLIVEDFQVGCHVQLVTPTSWKGLHRNQVFSDYGTPMELVFPRNKVFSYDVIHKALVYGFDISWMNLICQNRCGDTRLCSFNSSGEIFQCYIPYCFTMMGYWKTSSCDTLTQITSYAKDTIKAIWKGLVEIIKGPNSNYDGITKYKVGLAIGHYILPSFWAARILFGITFFIALLIYKWRKRHWSMYECIEIYLQQQNNLMPIGYSYKEIKKMARGFKDELGKGGFGTVFKGNLRSGPCVAIKMLGKSKGNGQDFVNEVTTIGRIHHLNVVQLLGFCIEGSKRALVYEFMPNGSLDKYIFSKEGSINLSYNQLHDISIGIARGIAYLHHGCEMKILHFDINPHNILLDENFIPKISDFGLAKLYSVQNSIVTMTAAKGTIGYMAPELFYKNIGGVSYKADVYSFGMLLMEMASKRKNLNTHAEHSSQLYFPFWIHGQLVKEGEIEMEDITEEDMKIVKKMIIVALWCIQFKPNDRPSMSKVVEMLEGDIESLEIPPEPTMYPDETISADETTTSDQTISSDFTSSSDSGENITNPLLENIS* 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5195 722 Pfam Protein tyrosine and serine/threonine kinase 398 666 IPR001245 GO:0004672|GO:0006468
Mal1g5195 722 MobiDBLite consensus disorder prediction 686 722 - -
Mal1g5195 722 MobiDBLite consensus disorder prediction 675 722 - -
Mal1g5195 722 ProSiteProfiles Protein kinase domain profile. 396 681 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g5195 722 Gene3D Transferase(Phosphotransferase) domain 1 471 675 - -
Mal1g5195 722 SUPERFAMILY Protein kinase-like (PK-like) 379 667 IPR011009 -
Mal1g5195 722 ProSitePatterns Protein kinases ATP-binding region signature. 402 424 IPR017441 GO:0005524
Mal1g5195 722 Pfam Wall-associated receptor kinase galacturonan-binding 29 92 IPR025287 GO:0030247
Mal1g5195 722 PANTHER RUST RESISTANCE KINASE LR10-RELATED 9 695 IPR045874 GO:0004672
Mal1g5195 722 Gene3D Phosphorylase Kinase; domain 1 374 470 - -
Mal1g5195 722 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 9 695 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5195 Mal-Chr1 124646735 124650009 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5195 1 682 Receptor kinase-like Gene Family AT5G38260 33.663 7.82e-112 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mal1g5195 PK_Tyr_Ser-Thr 4.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5195 - - gmx:100305367 873.618