Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5193 ATGTGCTGGGTAAGAGTGATATTACTGATCTTGTTCCAATTTATGCTTCTACTTCACCAAGGTAGCAGCACTAATCTTTCTATTGAGAAAAAACATTCTTGTCCACCTTCATCTTGTGGCGAAATTTCCAACATAACCTATCCATTTCGATTAAAAGATGACCCAATTCATTGCGGGGACAAAAGGTACGAGCTATCTTGTGAAAATAACGTGACAACTTTAAATCTGTATTCGGGAAAATATTATGTGAGGTCCATCAACTACAACAATTTCACAATCCGAGTTGTTGATCCTGGTGTTCAACAAGATAACTGCTCTTCACTTCCTCTCAATTTCTTGTCTCAAACTAATTTCTGTGATCCCTATGATATCGAGGAGCAAAATTGCACAGATCCATACCAAGTTGGGCAATACTATGATCAGCTTCTTTTTAAGCATATAGTTTACATGAATTGTAGCCATCCAGTGACTAATAATCCTAAATATGTCAATATTTCTTCCTGTCTCCAACTTGGTTACTCCAAAGGTAATTATATTTATGCTATTGCTGGTGATTTAATTGTTGAAGACTTTCAAGTTGGTTGTCATGTGAAATTGGTTACTCCAACTTCTTGGAAGGGTTTGCATAGAAATCAAATACTTCCTTACGATGTCATTCATCAGGCGTTAGTATATGGATTTGAGATTTCATGGTTGCGTCTTATGTGCAAAAATACTTGCGGAGATTTAACGCTCTGCTCCTTCAACACTTCCACCGAGATAATTCAATGCTCTCACCATCCCTCTTGTGTTGTAACTGGGGAATGGACCAGTATTCTTTGTGTTATATCAATTGTAAAAAATTATACTATCATCGGTATATGGATAGGACTGGTTGAAATAATAAAAGGACCAAACTCATCATATGATAATTTTATGAAATATAAAGTAGGATTAGTCATTGGACACTATATTCTACCATCACTCTGGGCTGCTAGACTTCTGTTTGGGATAACATTCTTTATTTCACTATTGATATACAAATGGAGAAAAAGACATTGGTCAGTGTATGAATGCATTGAAATATATCTACAGCAACAAAACAACCTCATGCCCATTGGATATTCATACAAACAAATTAAGAAAATGGCTAGAAGTTTCAAAGACGAATTGGGTAAAGGAGGCTTTGGCACTGTGTTCAAGGGAAACCTACGCAGTGGGCCTTGTGTGGCAATCAAGATGTTGGGTAAGTCAAAAGGTAATGGGCAAGACTTTATCAATGAAGTCACAACCATTGGAAGAATACATCATTTGAACGTCGTACAATTACTTGAATTTTGTATTGAAGGTTCTAAACGTTCTCTTGTTTATGAATTCATGCCCAACGGATCTCTTGATAAATTTATTTTTCCTAAAGAAGGGAGTATAAATTTAAGCTACAACCAAATTTATGATATTTCACTAGGAGTAGCTCGTGGTATTGCTTATCTTCACCATGGATGTGAAATGAAGATTTTGCATTTTGATATCAAGCCTCACAATATTTTGCTTGATGAGAACTTTATCCCTAAGATATCTGATTTTGGGTTGGCAAAGCTACATCCAAAAGAGAAAAGCATTGTCACCATGACTGCGGCACGAGGAACAATTGGATATATGGCTCCAGAATTGTTCTACAAAAATATCGGGGGAGTGTCGTATAAAGCTGATGTTTATAGTTTTGGGATGCTTTTGATGGAGATGGCAAGCAAGAGGAAAAATCTTAACACCCATGCAGAGCATTCAAGCCAAACTTATTTTCCCTTTTGGATTTATGATCAACTTGGAAAAGAGGGAGAAATAGAAATTGAAAATGTGACAGAAGAGGATATGAAAATAGTAAAGAAGATGATCATGGTCGCTCTTTGGTGTATACAGTTGAAGCCAAAAGATCGTCCATCGATGAGTAAAGTGGTGGAGATGCTTGAAGGAGATATTGAAAGCATTGAAATGCCTCCCGAACCAACCATGTATCCAAATGAAACAATTTCAAGTGATGAAACCACCAACTCAGACCAAACAATATGTAGTAGTGACTTAATTAGTTTTAGTGATTCTAGGGAAGTCACTACTAATCCCCTTGTAGGGAATATTTCTTGA 2118 0.3645 MCWVRVILLILFQFMLLLHQGSSTNLSIEKKHSCPPSSCGEISNITYPFRLKDDPIHCGDKRYELSCENNVTTLNLYSGKYYVRSINYNNFTIRVVDPGVQQDNCSSLPLNFLSQTNFCDPYDIEEQNCTDPYQVGQYYDQLLFKHIVYMNCSHPVTNNPKYVNISSCLQLGYSKGNYIYAIAGDLIVEDFQVGCHVKLVTPTSWKGLHRNQILPYDVIHQALVYGFEISWLRLMCKNTCGDLTLCSFNTSTEIIQCSHHPSCVVTGEWTSILCVISIVKNYTIIGIWIGLVEIIKGPNSSYDNFMKYKVGLVIGHYILPSLWAARLLFGITFFISLLIYKWRKRHWSVYECIEIYLQQQNNLMPIGYSYKQIKKMARSFKDELGKGGFGTVFKGNLRSGPCVAIKMLGKSKGNGQDFINEVTTIGRIHHLNVVQLLEFCIEGSKRSLVYEFMPNGSLDKFIFPKEGSINLSYNQIYDISLGVARGIAYLHHGCEMKILHFDIKPHNILLDENFIPKISDFGLAKLHPKEKSIVTMTAARGTIGYMAPELFYKNIGGVSYKADVYSFGMLLMEMASKRKNLNTHAEHSSQTYFPFWIYDQLGKEGEIEIENVTEEDMKIVKKMIMVALWCIQLKPKDRPSMSKVVEMLEGDIESIEMPPEPTMYPNETISSDETTNSDQTICSSDLISFSDSREVTTNPLVGNIS* 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5193 705 ProSitePatterns Protein kinases ATP-binding region signature. 384 406 IPR017441 GO:0005524
Mal1g5193 705 Gene3D Transferase(Phosphotransferase) domain 1 453 658 - -
Mal1g5193 705 Pfam Wall-associated receptor kinase galacturonan-binding 34 97 IPR025287 GO:0030247
Mal1g5193 705 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 12 678 - -
Mal1g5193 705 ProSiteProfiles Protein kinase domain profile. 378 663 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g5193 705 PANTHER RUST RESISTANCE KINASE LR10-RELATED 12 678 IPR045874 GO:0004672
Mal1g5193 705 Pfam Protein kinase domain 381 646 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g5193 705 MobiDBLite consensus disorder prediction 656 677 - -
Mal1g5193 705 ProSitePatterns Serine/Threonine protein kinases active-site signature. 498 510 IPR008271 GO:0004672|GO:0006468
Mal1g5193 705 Gene3D Phosphorylase Kinase; domain 1 356 452 - -
Mal1g5193 705 SUPERFAMILY Protein kinase-like (PK-like) 362 649 IPR011009 -
Mal1g5193 705 SMART serkin_6 378 648 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5193 Mal-Chr1 124636628 124639294 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5193 14 705 Receptor kinase-like Gene Family AT5G38260 33.846 3.85e-114 356
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mal1g5193 Pkinase 1.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5193 - - gmx:100305367 862.448