LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal1g5191	ATGAAACAAAACACAAAGCTCACACAACTATACCAAATTTTAATCGTAGCAATAACCATGGTAACAATATTTGCATCCAGTGAATCCTCATTTTCTTCATCCCTACCCGGTTGCAAAAATACATGTGGAGATGTAAAAATTCCATACCCATTTGGAGTATCAAATTCATCAATACCAAATCAAGGACCCTGTTTTCTAGAGCCCAATTTTGAACTCACATGTGAAAATGACACAAAGTTACTTTGGGGCAATGTACAAGTTTCCAACATAAGCATCCTCGAAGGACAACTTGAAGTGTGGTTTTCTGTCTCCCGCTATTGTGGTAGCGAACATGCCAATGACTCTTTTTTAGACACTGCCGGTTTCAGCATATCACCCAAAGAAAACAAGTTCTTAACAGTTGGTAGTGATAGTTACGGTTATCTCAACAGCATTTACAACAACGAAACATATTCAACCGGTTGCTTAACAAGATGTAACGATAATCGAAACAGAATTAAAAACGGAACATGTTCGGGTATTGGTTGTTGTCAAGTTGATATTCCACCTATGATGAGGAATATAAGTATACAATCTTTTGATTTTCTTAATTCCACTGAATCTTTGGGATGTAGCTATTCTTTTGTTGTTAAAAATGGATATTATAATTTTTCTGTTTATCATTTGGACAATTTTCCTTATACTGAGCTTCCATTGATTCTTGATTGGAGTGTTGGAAGTGAAAATTGTAAGGCTTCAAAGGGTGAAGATGATTATGCTTGCAAGAAGAATAGTGTTTGTGATGATAATGACATTGATTTTGATATTGACGAATGTAAGACATCGAATAACACATGCATAAATGAAGATCATTGTCGAAACATGGATGGATATTACGAATGTTTTTGTCCGAAGGGGCAATCCGGAAATGGAACAAAGGAAGGAGGTTGTCATAGACAAGATGTAACTACCAAGATTGTCATTGGATCAAGTGCTGGAATAATTATTCTATTTGTGGGGATTTCATCTCTATGCATGATATACCAAAAAAGAAAACTCTTCAAACTAAAGCAAAAATTCTTTCAACAAAATGGTGGTTTCATTTTGCTACAACAACTGTCTACAAGAGAAGACACGTCTCAATCTGCTCAAATATTCACAGAAGAGGAACTTAAAAAAGCCACCAACAACTATGATGAAAGTTTAATCATCGGCAGAGGAGGTTTTGGTACAGTTTTCAAAGGAGTTTTACCCGATAACAAAATTGTCGCTGTCAAAAAGTCCAAAATAATAGACCAAAATCAAATCGAACAATTCATCAATGAGGTGGTTGTTTTATCCCAAATAAATCATAGGAATGTTGTCAAACTCTTAGGGTGTTGTTTGGAGACTGAAGTTCCTTCCTTGGTTTACGAATTTGTTAGCAATGGCACACTTTTCGATTTCATACATAGTACTAAAGATCAAGCAAATAATCTGACATGGAAAACACGTTTGAGAATAGCAGCAGAGACAGCTGGAGCTTTATCTTATCTACATTCGGCCGCATCAATTCCAATTATCCATAGAGATGTTAAGAGCACCAACATTCTCTTGGATGACAATTACACTGCAAAAGTTTCCGATTTTGGAGCTTCAAGATTGGTTCCACTTGATCAAACCGAGTTAGCAACAATGGTGCAAGGAACTCTTGGATACTTAGATCCAGAGTATATGCAAACACATCAATTAACTGAAAAAAGTGATGTTTATAGTTTTGGTGTAGTTCTTGCAGAGCTCTTAACTGGGAATAAACCTATTTCTTTCAATAGGCCTGAAGAGAAAATTAGTCTTGCTATGCACTTTTTGTCTTGTTTGAAACAAGATAGAATTTTTGAAGCTATTCAAGTTGGTATTTTGAATGATGAAAACAAGAAAGAGATTATGGAGGTTGCTATTCTTGCAGCAAGATGTTTGAGACTTCGAGGTGAGGAAAGACCAACTATGAAAGAAGTGGCTATGGAGTTGGATGGTATAAGGTTATTGGAGAAGCATCCTTGGAATGGTGTAGAGCTAAATTTTGAGGAGAGTCAGCGCTTACTTCATGAGGCATCTTGTAGCATTTATAATGAAACTGGTGATAGTTATAACCTTGGATATAGTGGGTATGATAGCTTGAAAGGTCATTCGTTGATTGCCATGGATGATGGAAGATGA	2175	0.3609	MKQNTKLTQLYQILIVAITMVTIFASSESSFSSSLPGCKNTCGDVKIPYPFGVSNSSIPNQGPCFLEPNFELTCENDTKLLWGNVQVSNISILEGQLEVWFSVSRYCGSEHANDSFLDTAGFSISPKENKFLTVGSDSYGYLNSIYNNETYSTGCLTRCNDNRNRIKNGTCSGIGCCQVDIPPMMRNISIQSFDFLNSTESLGCSYSFVVKNGYYNFSVYHLDNFPYTELPLILDWSVGSENCKASKGEDDYACKKNSVCDDNDIDFDIDECKTSNNTCINEDHCRNMDGYYECFCPKGQSGNGTKEGGCHRQDVTTKIVIGSSAGIIILFVGISSLCMIYQKRKLFKLKQKFFQQNGGFILLQQLSTREDTSQSAQIFTEEELKKATNNYDESLIIGRGGFGTVFKGVLPDNKIVAVKKSKIIDQNQIEQFINEVVVLSQINHRNVVKLLGCCLETEVPSLVYEFVSNGTLFDFIHSTKDQANNLTWKTRLRIAAETAGALSYLHSAASIPIIHRDVKSTNILLDDNYTAKVSDFGASRLVPLDQTELATMVQGTLGYLDPEYMQTHQLTEKSDVYSFGVVLAELLTGNKPISFNRPEEKISLAMHFLSCLKQDRIFEAIQVGILNDENKKEIMEVAILAARCLRLRGEERPTMKEVAMELDGIRLLEKHPWNGVELNFEESQRLLHEASCSIYNETGDSYNLGYSGYDSLKGHSLIAMDDGR*	725

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mal1g5191	724	SMART	egfca_6	268	311	IPR001881	GO:0005509
	Mal1g5191	724	Gene3D	Phosphorylase Kinase; domain 1	361	466	-	-
	Mal1g5191	724	ProSitePatterns	Protein kinases ATP-binding region signature.	397	420	IPR017441	GO:0005524
	Mal1g5191	724	ProSitePatterns	Aspartic acid and asparagine hydroxylation site.	285	296	IPR000152	-
	Mal1g5191	724	Gene3D	Laminin	266	307	-	-
	Mal1g5191	724	Pfam	Wall-associated receptor kinase galacturonan-binding	38	96	IPR025287	GO:0030247
	Mal1g5191	724	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	513	525	IPR008271	GO:0004672\|GO:0006468
	Mal1g5191	724	PANTHER	WALL-ASSOCIATED RECEPTOR KINASE 2-LIKE ISOFORM X2	24	692	-	-
	Mal1g5191	724	Pfam	Protein kinase domain	393	658	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mal1g5191	724	Gene3D	Transferase(Phosphotransferase) domain 1	467	677	-	-
	Mal1g5191	724	SUPERFAMILY	EGF/Laminin	268	303	-	-
	Mal1g5191	724	ProSitePatterns	Calcium-binding EGF-like domain signature.	268	294	IPR018097	GO:0005509
	Mal1g5191	724	CDD	STKc_IRAK	397	665	-	-
	Mal1g5191	724	ProSiteProfiles	EGF-like domain profile.	268	306	IPR000742	-
	Mal1g5191	724	SMART	serkin_6	391	674	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mal1g5191	724	PANTHER	WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21	24	692	IPR045274	GO:0007166
	Mal1g5191	724	SUPERFAMILY	Protein kinase-like (PK-like)	372	662	IPR011009	-
	Mal1g5191	724	ProSiteProfiles	Protein kinase domain profile.	391	674	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mal1g5191	Mal-Chr1	124621515	124624402	Dispersed/Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mal1g5191	38	724	Receptor kinase-like Gene Family	AT1G21230	43.288	0.0	546

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_WAK	Mal1g5191		Pkinase	6e-50	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mal1g5191	-		-	gsj:114381577	949.888