Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5188 ATGGCAGTAGCACATACTACTTTGATTATGCTACTCATTCTTCTAAATCTTCTGCTTATCAATAGCAGCAGCTATCATGATGAGTGGACAGAATCGTCTTGTGGACATAACGAACCAATTATTCGATTCCCCTTCCAACTCGTTAAGGAATCATCACAAGATCGATGTATTTATCCTGAGTTTTGCCTATATTGCAGTGAAAATAACAGAACCATGATTGTGCTCTCTTCCACTTCAGAATCAGAATCAACAATATCCTTTTTCAATTGTTCTTCGGTTAAGAAACTACACTTGAGAAACCAAGATCAGACAAGAGATGATTCACAAGATATGATCACTTGTCCAATTTACGCTTCTAATTCTGACGAAAGTGTTGTCACGTTGGACCTTGCATCATGTACTAAGATGTTTGATGTCAGCACAACTATCGATGCAAATCGCCTATCGATGAATTTCCTCGTTTTGAGTTGGTCCAAAACAAATTGTGCTGTGTGTGAAGCGAAAGGCATGAAATGTAGATGGAACACAAACAACACTAAATATGACATTGAATGTTTCGACCACAAAAGAATTAGGAAAACAATCCATATTCCAAAATCTCTTATTTTCGCTAGTACAGGTTCAATTATATTGGGGTTGGTCATCATTGCAATTACAAAGATTTATCTACATTTTAGGGAGAAAAAAGAAGATCAAGTTAGAATCGATAAGTTTTTAGATGATTTTAGAGCACAAAAGCCTGCTAGATTTTCCTATGCTGATATAAAAAGAATCACAAGTGGGTTTAAGGAGAAGCTGGGAGAAGGAGCTCACGGAACAGTGTTTAAGGGAAAACTCTCTAGTGAGATTTTGGTGGCTGTGAAGATTCTCAACAATACACAAGGAGAAGGGAAAGAGTTCATCACTGAAGTGGAAATTATGGGCAAAATCCACCACATCAACGTGGTTCGGTTGCTTGGTTTCTGCGCAGATGGAATTCACCGTGCTCTTGTATACAATTTGTTTCCAAAAGGTTCGCTACAGAGCTCCATATTTCCACCAGATAACAAGGATTATTTCTTGGGGTGGGAGAAGCTGCAACAAATTAGTCTTGGTATAGCGAAAGGAATTGAGTATCTTCATGAGGGTTGTAGCCATCCAATCCTTCACTTTGACATTAACCCTCACAATGTTTTGCTAGATCCAAAAATTTCGGACTTTGGACTCGCCAAATTATGTGCCAAGAATGTTAGCGTGGTGTCGATGACTGCTGCTAGGGGAACCTTGGGATATATGGCGCCTGAAGTTCTATCTCGAAATTTTGGGAATGTTTCTCTTAAGTCAGATATTTATAGTTATGGAATGCTATTGCTAGAAATGGTTGGAGGAAGAAAGAATGTAGATTCGTCATCCGCAGAAAATCTCCATGTTTTATTATATCCAGAATGGATTCATAACTTATTGGAAGGAGACATACATATAAATATAGAAGATCAAGGTGATGTTAAATTTGCAAAGAAACTAGCAATTGTAGGACTTTGGTGCATTCAGTGGCAGCCAATGAATCGTCCTTCCATAAAAACCGTTATACAAATGTTGGAAACAAGATATGACCACCAGTTAACTATTCCACCTAATCCATTTCATTCCACCAATTCCATTACTACTAGTGAAGGTTCTTTAGCAAGACAACCTTTTCAAATGGAAGTGATTCAAGAATAA 1701 0.378 MAVAHTTLIMLLILLNLLLINSSSYHDEWTESSCGHNEPIIRFPFQLVKESSQDRCIYPEFCLYCSENNRTMIVLSSTSESESTISFFNCSSVKKLHLRNQDQTRDDSQDMITCPIYASNSDESVVTLDLASCTKMFDVSTTIDANRLSMNFLVLSWSKTNCAVCEAKGMKCRWNTNNTKYDIECFDHKRIRKTIHIPKSLIFASTGSIILGLVIIAITKIYLHFREKKEDQVRIDKFLDDFRAQKPARFSYADIKRITSGFKEKLGEGAHGTVFKGKLSSEILVAVKILNNTQGEGKEFITEVEIMGKIHHINVVRLLGFCADGIHRALVYNLFPKGSLQSSIFPPDNKDYFLGWEKLQQISLGIAKGIEYLHEGCSHPILHFDINPHNVLLDPKISDFGLAKLCAKNVSVVSMTAARGTLGYMAPEVLSRNFGNVSLKSDIYSYGMLLLEMVGGRKNVDSSSAENLHVLLYPEWIHNLLEGDIHINIEDQGDVKFAKKLAIVGLWCIQWQPMNRPSIKTVIQMLETRYDHQLTIPPNPFHSTNSITTSEGSLARQPFQMEVIQE* 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5188 566 Pfam Wall-associated receptor kinase galacturonan-binding 32 80 IPR025287 GO:0030247
Mal1g5188 566 PANTHER RUST RESISTANCE KINASE LR10-RELATED 80 566 IPR045874 GO:0004672
Mal1g5188 566 PANTHER RUST RESISTANCE KINASE LR10-RELATED 16 79 IPR045874 GO:0004672
Mal1g5188 566 ProSiteProfiles Protein kinase domain profile. 260 535 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g5188 566 Pfam Protein kinase domain 263 524 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g5188 566 Gene3D Transferase(Phosphotransferase) domain 1 335 536 - -
Mal1g5188 566 SUPERFAMILY Protein kinase-like (PK-like) 244 528 IPR011009 -
Mal1g5188 566 Gene3D Phosphorylase Kinase; domain 1 234 334 - -
Mal1g5188 566 ProSitePatterns Protein kinases ATP-binding region signature. 266 288 IPR017441 GO:0005524
Mal1g5188 566 PANTHER RECEPTOR-LIKE KINASE 80 566 - -
Mal1g5188 566 PANTHER RECEPTOR-LIKE KINASE 16 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5188 Mal-Chr1 124574932 124576861 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5188 115 540 Receptor kinase-like Gene Family AT5G38260 37.585 5.01e-87 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mal1g5188 Pkinase 9.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5188 - - gmx:100811907 769.615