Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5187 ATGGAACAACAACAGCACGAAAGGTGCATTGAATGTTTTGACTGCAACAACGAACGGAAAAAAATTCAGATTTCAAAATCTGTGATTTTCGCTACTATAGGTTCAGTTATGTTGGGGTTGGTCACCATTATATTAATTAAAATTTATCTATATTTCAAAGAAAAAGAAGAAGATCAAGTTAGAATTGATAAATTTTTAGAGGAATATAGAGCACAAAATCCTGCTAGATTTTCCTATGCTGATATAAAAAGAATCACGAGTGGGTTTCAGGCAAAGCTAGGAGAAGGAGCACACGGAACCGTGTTTAAAGGAAAACTCTCTAGTGAGATTCTGGTGGTTGTGAAGGTTCTCAATAAGACACAAGGAGAAGGCAAAGAGTTCATCACTGAAATGGAAATTATGGGTAAAATCCACCACATCAATGGAATTCACCGCGCTCTTGTATACAATTTGTTTCCAAAAGGTTCGTTACAGAGCTTCATATTTCCACCAGATAACAAGGATCATTTCTTGGGGTGCAAGAAGCTGCAACAAATTAGTCTTGGTATAGCAAAAGGAATCGAGTATCTTCATGAGGGTTGTAGCCATCCAATCCTTCACTTTGACATCAACCCTCACAGTGTTTTTCTAGATGAAACCTTCACTCCAAAAATTTCGGACTTTGGACTCGCCAAATTATGTGCAAATAATCTTATTCTGTCTCGAAATTTTGGAAATGTTTCTCTTAAGTCAGATATATACAGTTATGGGATGTTGTTGCTAGAAATGGTTGGAGGAAGAAAGAATGTAGATACGTCATCTGCGGAAAATTGTCAAGTTTTATATCCAGAATGGATCCATAATTTATTGGAAGGAGATATACATATTAATATTGAAAATGAAGGGGATGTTAAAATTGCAAAGAAACTTGCAATTGTCGGACTTTGGTGCATTCAGTGGCAGCCAATGAACCGTCCATCCATAAAAACCGCCATACAAATGTTGGAAACAGAAGATGACAACCAGTTAACTTTTCCACCTAATCCTTTTCATTCCACTGCTTCCAATACCACTAGTAAAGGATCTTTGGCAAGACGACCTTTCCAAATGGAAGTGATTCAAGAATAA 1107 0.3677 MEQQQHERCIECFDCNNERKKIQISKSVIFATIGSVMLGLVTIILIKIYLYFKEKEEDQVRIDKFLEEYRAQNPARFSYADIKRITSGFQAKLGEGAHGTVFKGKLSSEILVVVKVLNKTQGEGKEFITEMEIMGKIHHINGIHRALVYNLFPKGSLQSFIFPPDNKDHFLGCKKLQQISLGIAKGIEYLHEGCSHPILHFDINPHSVFLDETFTPKISDFGLAKLCANNLILSRNFGNVSLKSDIYSYGMLLLEMVGGRKNVDTSSAENCQVLYPEWIHNLLEGDIHINIENEGDVKIAKKLAIVGLWCIQWQPMNRPSIKTAIQMLETEDDNQLTFPPNPFHSTASNTTSKGSLARRPFQMEVIQE* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5187 368 Gene3D Phosphorylase Kinase; domain 1 60 149 - -
Mal1g5187 368 SUPERFAMILY Protein kinase-like (PK-like) 69 329 IPR011009 -
Mal1g5187 368 ProSitePatterns Protein kinases ATP-binding region signature. 93 115 IPR017441 GO:0005524
Mal1g5187 368 Pfam Protein tyrosine and serine/threonine kinase 89 327 IPR001245 GO:0004672|GO:0006468
Mal1g5187 368 PANTHER RUST RESISTANCE KINASE LR10-RELATED 6 368 IPR045874 GO:0004672
Mal1g5187 368 PANTHER RECEPTOR-LIKE KINASE 6 368 - -
Mal1g5187 368 Gene3D Transferase(Phosphotransferase) domain 1 152 339 - -
Mal1g5187 368 ProSiteProfiles Protein kinase domain profile. 87 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5187 Mal-Chr1 124555956 124557300 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5187 34 343 Receptor kinase-like Gene Family AT4G18250 35.244 1.30e-65 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Mal1g5187 Pkinase 2.1e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5187 - - cam:101495452 563.533