Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5185 ATGGCAGGAACAGCACATACTACTTTGATTCTTGAACTTCTTCTAATCTTGCTTATCAATAGTTGCAGTGCTCACGACCAGTGTAGAGAATCATCTTGTGGAGCTAACCAACCTCTTATTAAATTTCCCTTCCAACTCGTCAAGGAATCACAAGATGAATGTGTTTATCCTAAAGAGTTTTGTCTATCTTGTACTGAAAATAAGAAAACCATGATTTCACTCCCTACCACTTCAGGTGAAATCAAATTCTTTGTCGTTAATATTGACTATGAATCACACTTGATGTTAATTTCAGACCCAGAAAATTGCCTTCCCAAAAAGTTTTTGAAACTTAACAATTCATCATTTCTACCTTACCGATTTCATTCATCTGATCCATATTTAGATACAAAACTTTCCTTCTTCAACTGCTCATCAGTTAGGAAACACCACCTGAGAAACAACGATCAGTCATCTCCAAATTCACAAGATATGATCACTTGTCCAATTTATATTTCTAATTCCAACGATGATATCGTCGATTTGGATCTTGTATCGTGTACCAAGATGTTCGACGCCAATGTGTCAATCATGGCATCAGACCTGATGTTTAATTCGCTGAGTTTGAGTTGGCCCAAACCAAGTTGCGCAGAGTGCGAAGCCAATGGTATGAAATGCAAATGGAAGAGCAACAATATCAAGCATGGAATTGAATGTACTTATTGCAACCACAAACTGAAAGTATCTCAATCTCCAAAACCTCTTATTTTTTCAGCTATAGGTTCAATTATATTGGGGTTAACCACCATTGTATTTATTAAGATTTATCTACATTTTAGAGAAAAAGAAGAAGATCAAGTTAGAATTGATAAGTTTTTGGAGGATTATAAAGCACAAAAGCCGGCCAGATTTTCATATTCTGATATAAAAAGAATAACAGGTGGGTTTAAGGAAAAGTTAGGAGAAGGAGCTCACGGAACCGTGTTTAAAGGAAAACTCTCTAGTGAGATTTTGGTGGCTGTGAAGATTCTCAACAATTCACATGGAGAAGGGAAAGAGTTCATCACTGAAGTGGAAATTATGGGCAAAATTCACCATATCAATGTTGTTCGTTTGCTTGGCTTTTGCGCAGAAGGCATTCACCGCGCTCTTGTATACAATTTTTTTCCAAAAGGCTCATTACAAAGCTTCATATTTCCAGCAGATAACAAGGACCATTTCATGGGGTGGGAAAAGCTACAACAAATTAGTCTTGGTATTGCAAAAGGAATCGAGTATCTTCATGAAGGTTGTAGCCATCCAATCCTTCACTTTGACATCAACCCTCACAATGTTCTGCTAGATGACACCTTCACTCCAAAAATTTCGGACTTTGGACTAGCCAAATTATGTGCCAAGAATCTTAGTGTAGTGTCCATGACAGCTGCTAGGGGAACCTTGGGATATATGGCGCCTGAAGTTCTATCTCGAAATTTTGGAAATGTTTCTCTTAAGTCAGATATATACAGTTATGGGATGTTGTTGCTAGAAATGGTTGGAGGAAGAAAGAATGTAGATACGTCATCTGCGGAAAATTGTCAAGTTTTATATCCAGAATGGATCCATAATTTATTGGAAGGAGATATACATATTAATATTGAAAATGAAGGGGATGTTAAAATTGCAAAGAAACTTGCAATTGTCGGACTTTGGTGCATTCAGTGGCAGCCAATGAACCGTCCATCCATAAAAACCGCCATACAAATGTTGGAAACAGAAGATGACAACCAGTTAACTTTTCCACCTAATCCTTTTCATTCCACCTCTTCCCTTACCACTAGTGAAGGATCTTTGGCTAGACGGCCTTTCCAAATGGAAGTGATTCAAGAATAA 1851 0.3749 MAGTAHTTLILELLLILLINSCSAHDQCRESSCGANQPLIKFPFQLVKESQDECVYPKEFCLSCTENKKTMISLPTTSGEIKFFVVNIDYESHLMLISDPENCLPKKFLKLNNSSFLPYRFHSSDPYLDTKLSFFNCSSVRKHHLRNNDQSSPNSQDMITCPIYISNSNDDIVDLDLVSCTKMFDANVSIMASDLMFNSLSLSWPKPSCAECEANGMKCKWKSNNIKHGIECTYCNHKLKVSQSPKPLIFSAIGSIILGLTTIVFIKIYLHFREKEEDQVRIDKFLEDYKAQKPARFSYSDIKRITGGFKEKLGEGAHGTVFKGKLSSEILVAVKILNNSHGEGKEFITEVEIMGKIHHINVVRLLGFCAEGIHRALVYNFFPKGSLQSFIFPADNKDHFMGWEKLQQISLGIAKGIEYLHEGCSHPILHFDINPHNVLLDDTFTPKISDFGLAKLCAKNLSVVSMTAARGTLGYMAPEVLSRNFGNVSLKSDIYSYGMLLLEMVGGRKNVDTSSAENCQVLYPEWIHNLLEGDIHINIENEGDVKIAKKLAIVGLWCIQWQPMNRPSIKTAIQMLETEDDNQLTFPPNPFHSTSSLTTSEGSLARRPFQMEVIQE* 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5185 616 Pfam Protein kinase domain 310 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g5185 616 ProSitePatterns Protein kinases ATP-binding region signature. 313 335 IPR017441 GO:0005524
Mal1g5185 616 PANTHER RECEPTOR-LIKE KINASE 15 616 - -
Mal1g5185 616 SUPERFAMILY Protein kinase-like (PK-like) 291 577 IPR011009 -
Mal1g5185 616 Gene3D Transferase(Phosphotransferase) domain 1 382 587 - -
Mal1g5185 616 Gene3D Phosphorylase Kinase; domain 1 281 381 - -
Mal1g5185 616 PANTHER RUST RESISTANCE KINASE LR10-RELATED 15 616 IPR045874 GO:0004672
Mal1g5185 616 ProSiteProfiles Protein kinase domain profile. 307 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g5185 616 Pfam Wall-associated receptor kinase galacturonan-binding 28 99 IPR025287 GO:0030247
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5185 Mal-Chr1 124548754 124550703 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5185 246 603 Receptor kinase-like Gene Family AT4G18250 42.473 7.69e-93 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mal1g5185 Pkinase 5.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5185 - - gmx:100813531 823.542