Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5180 ATGATGAGGAATATAACTGTACAAGTTTTTTATTTTCCTAATTCCACTGAATTTTGGGGATGTAGCTCTTCTTTTGTTGTTAAAGATGGATCCTATAATTTTTCTATTGCTCATTTGGATAATTTTCCTTATGAAAAGCTTCCATTGATTCTTGATTGGAGTGTGGGAAAGAATTGTAAGGAAGATGATTATGGTTGCAGGAAGAATAGTGATTGCGTTGATGTGGACATTGATTTTGGTTACCAATGTAAGTGTAAGGAAGGTTATGAAGGAAATCCTTATCATCCAGATGGCTGCATAGGATCAAGTTCTGGACTCATTGTCCTATTTGTGGCGGTTGCATCTATATACTTGACATACCAAAAAAGGAAACTCATCAAACTAAAGCAAAAATTCTTTCAACAAAATGGTGGCTCCATTTTGCTACAACAACTATCTACAAGAGAAGACACAACACAATCAGCTCAAATATTCACAGAAGAGGAACTTAAGAAAGCCACCAAAAACTACGACGAAAGCTTAATCATCGGTAGAGGAGGTTTTGGTACAGTCTTTAAAGGAATTTTACCAGACAACAAAATTGTCGCCGTCAAGAAGTCCAAAATAATAGATGCAAATCAAATTGAGCAATTCATTAATGAGGTAGTTGTTTTATCCCAAATTAATCATAGGAATGTCGTCAAACTCTTAGGGTGTTGTTTAGAGACTGAAGTTCCTTCATTGGTGTATGAATTTGTTAGCAACGGTACACTTTTTGATTTCATACAAAATACTAGAGATAAAACAAATAATCCGACATGGAAAACGCGTTTAAGGATAGCAGCAGAGACAGCTGGAGCATTATCATATCTTCATTCATCTGCATCAATTCCAATTATCCATAGAGATGTTAAAAGTACCAATATTCTCTTGGATGACAATTACACTGCAAAAGTTTCCGATTTCGGAGCTTCAAGATTAGTTCCACTTGATCAAACCGAAATAGCAACAATGGTGCAAGGAACACTTGGATACTTAGATCCAGAGTATATGCAAACACATCAATTAACCGAGAAAAGTGATGTTTATAGCTTTGGTGTAGTTCTTGCAGAGCTTCTAACAGGGGACAAACCTCTTTCTTTTAACAGACCAGAAGAGTCCATTAGTCTTGCTATGCACTTTTTGTCTTGTTTAAAACAAGATACAATTTTTGAAGCTATTCAAGATGGAATTTTGAATGATGATAACAAGAAAGAAATTAAAGAGGTTGCTATTCTTGCTGCAAGGTGTTTAAGACTTAGAGGTGATGAAAGACCTAGTATGAAGGAAGTGGCTATGGAGTTGGATGGCATAAGGTTAATGGAGAAGCATCCTTGGAATGATACAGAGCTAAATTTTGAGGAGAGTCAACGCTTACTTCATGAGGCATCTTGTAGTATTTATAATGAAACTGGTGATAGCTATAACCTTGGATATAGTGGTTATGATAGCTTGAAAGATCAACCATTGATTGCCTTGGATGATGGAAGATGA 1512 0.3578 MMRNITVQVFYFPNSTEFWGCSSSFVVKDGSYNFSIAHLDNFPYEKLPLILDWSVGKNCKEDDYGCRKNSDCVDVDIDFGYQCKCKEGYEGNPYHPDGCIGSSSGLIVLFVAVASIYLTYQKRKLIKLKQKFFQQNGGSILLQQLSTREDTTQSAQIFTEEELKKATKNYDESLIIGRGGFGTVFKGILPDNKIVAVKKSKIIDANQIEQFINEVVVLSQINHRNVVKLLGCCLETEVPSLVYEFVSNGTLFDFIQNTRDKTNNPTWKTRLRIAAETAGALSYLHSSASIPIIHRDVKSTNILLDDNYTAKVSDFGASRLVPLDQTEIATMVQGTLGYLDPEYMQTHQLTEKSDVYSFGVVLAELLTGDKPLSFNRPEESISLAMHFLSCLKQDTIFEAIQDGILNDDNKKEIKEVAILAARCLRLRGDERPSMKEVAMELDGIRLMEKHPWNDTELNFEESQRLLHEASCSIYNETGDSYNLGYSGYDSLKDQPLIALDDGR* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5180 503 Pfam Protein kinase domain 172 437 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g5180 503 ProSitePatterns Protein kinases ATP-binding region signature. 176 199 IPR017441 GO:0005524
Mal1g5180 503 SUPERFAMILY Protein kinase-like (PK-like) 151 441 IPR011009 -
Mal1g5180 503 Gene3D Transferase(Phosphotransferase) domain 1 246 465 - -
Mal1g5180 503 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 40 464 IPR045274 GO:0007166
Mal1g5180 503 ProSiteProfiles Protein kinase domain profile. 170 453 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g5180 503 Gene3D Phosphorylase Kinase; domain 1 135 245 - -
Mal1g5180 503 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 9 40 464 - -
Mal1g5180 503 SMART serkin_6 170 447 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g5180 503 CDD STKc_IRAK 176 444 - -
Mal1g5180 503 ProSitePatterns Serine/Threonine protein kinases active-site signature. 292 304 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5180 Mal-Chr1 124445337 124449022 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5180 17 503 Receptor kinase-like Gene Family AT1G21250 45.668 3.06e-149 442
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Mal1g5180 Pkinase 5.7e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5180 - - gsj:114381577 662.144