Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5178 ATGTCACTCACAATACTAGAAGTGATATTGCTGCTAATCAACCTTGTAATTGGTTTGAGTGATGCATCCATTGGATGTCCCTTTAATCTCAATTGTAAACACAACACCAAGATTCTTGAATTTCCTACTTATCCGGTCCCTCTAAAACTCATTGTCAGTGAAATTTTTTACAATTTGGAAAGAATAGATCTGTCTGATCCCAAAAATTGTTTACCGCAACTCTTACTTGACCACAACTTTTCATTAATTTTTCCTTTTAAGCCTTATCTCTCCAAAATTTCTGAACCTACCAATATTAGTTTCTTTAATTGTTCTTCAGTAGTACAACTCAGAAATAGCAATCAAATGGACGTTGGCGTGCAAGATACCAAATCTTGTCCAATTTATGTTGCCGATTCGGAATATGATAGTATCGTTGGTTCTGATCTTGTATACTGCATCAAACTATTTGATCGTGTTTCTTCATTCGACGCACGTATGATTCAATACAACAGACTACTATTGACATGGTCTGGAACAAATTTTGACATAGGATGCTTAAAATGTGAACACAAATTAAAGAAGAAGATTACTTTCATTATTTTATCCACCGCAGGTGTAATCATCGGTACAACTTTGTTAGTGCTTGTGCTCGGTGCTGCTGTTCGAATTCATCTCCATTTCAAGATGAAAAGCGAAGATCATACAAGAATAGAAAACTTTTTGAAGGATTACAAAGCTTTAAAGCCAACTAGATTCTCCTATGCTGACATAAAGAGAATCACAAATAAATTTAAGGATAAGATTGGAGAAGGAGCTCATGGAGCTGTTTACAAAGGTAAATTATCGAGCCAAATTCTTGTTGCTGTTAAAATGCTCAATAACGCAGAAGGAGATGGGAAGGAGTTCATAAATGAAGTGGGAACTATGGGCAAAATCCACCATCTCAATGTAGTTCGTTTGCTTGGCTTTTGCGCCGATGGATTTCATCGTGCTCTAGTCTATGACTTTTACCCAAATGGTTCGTTGCAGAAATTTATTTCTCCTCCTAGCAACAAAGATTGTTTCCTTGGATGGGAAAAGTTGCAACAAATTGCTCTAGGCATAGCCAATGGAATTGAGTATCTTCACCAAGGTTGTGATCAAAGAATTCTTCACTTTGACATCAATCCACATAACGTCTTGATTGATGACAATTTCACCCCAAAAATTACAGACTTCGGTTTGGCTAAGATGTGCTCGAAAAATCAAAGTACTATATCTATGACCGCAGCCAGAGGAACATTAGGATATATGGCCCCCGAAGTTTTTTCTAGAAACTTTGGGAATGTCTCTTATAAGTCTGATATCTATAGCTATGGTATGTTGCTATTGGAAATGGTTGGAGGAAGAAAAAATACAAACACAACCACAAATGAAGAAAACTTTCAAGTTCTATATCCAGATTGGATCTACAGTTTGCTTGAAGGAGAAGAAATACAAATCCCTATAGATGAAGAGGCAGATTTTCGAATTGCAAAAAAGTTGGCAATCGTGGGACTTTGGTGCATCCAATGGCAACCTATGCATCGTCCGTCTATGAAAACTGTGATGCAAATGCTACAAGGAGATGGAAACAAGTTAAAAGGTCCCTGCAACCCTTTTGGACCTACTACTTCAACTAATACATCTACTAGTCTTGTTGCAGAACGTATAAATTTGGAGCTTGAAGTGATTCAAGAAATAGACTAA 1710 0.3684 MSLTILEVILLLINLVIGLSDASIGCPFNLNCKHNTKILEFPTYPVPLKLIVSEIFYNLERIDLSDPKNCLPQLLLDHNFSLIFPFKPYLSKISEPTNISFFNCSSVVQLRNSNQMDVGVQDTKSCPIYVADSEYDSIVGSDLVYCIKLFDRVSSFDARMIQYNRLLLTWSGTNFDIGCLKCEHKLKKKITFIILSTAGVIIGTTLLVLVLGAAVRIHLHFKMKSEDHTRIENFLKDYKALKPTRFSYADIKRITNKFKDKIGEGAHGAVYKGKLSSQILVAVKMLNNAEGDGKEFINEVGTMGKIHHLNVVRLLGFCADGFHRALVYDFYPNGSLQKFISPPSNKDCFLGWEKLQQIALGIANGIEYLHQGCDQRILHFDINPHNVLIDDNFTPKITDFGLAKMCSKNQSTISMTAARGTLGYMAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNTNTTTNEENFQVLYPDWIYSLLEGEEIQIPIDEEADFRIAKKLAIVGLWCIQWQPMHRPSMKTVMQMLQGDGNKLKGPCNPFGPTTSTNTSTSLVAERINLELEVIQEID* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5178 569 Pfam Protein kinase domain 259 525 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g5178 569 ProSitePatterns Protein kinases ATP-binding region signature. 262 284 IPR017441 GO:0005524
Mal1g5178 569 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 15 569 - -
Mal1g5178 569 Gene3D Transferase(Phosphotransferase) domain 1 331 535 - -
Mal1g5178 569 ProSiteProfiles Protein kinase domain profile. 256 542 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g5178 569 PANTHER RUST RESISTANCE KINASE LR10-RELATED 15 569 IPR045874 GO:0004672
Mal1g5178 569 SUPERFAMILY Protein kinase-like (PK-like) 239 527 IPR011009 -
Mal1g5178 569 Gene3D Phosphorylase Kinase; domain 1 230 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5178 Mal-Chr1 124424603 124426402 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5178 200 564 Receptor kinase-like Gene Family AT1G66910 44.828 1.96e-104 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mal1g5178 Pkinase 3.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5178 - - adu:110273083 646.351