Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5177 ATGGCCAATTTTCACAATTTCAGCTTTCTACTAATTCTGTTCTTTCTCCTAATAACAAAACCAGTAACATCCAAAAATCAATGCACTAAAAAATGTGGAAACCTTCAAATTCAGTTTCCATTTAATCTCAAAAATAACATGAATCACACAAATCCTCAAGGTTTTGAATTATCATGCACAAACAAAGATGAAACCATATTAAAATTTCCCACAATTCCACTACAACTTTTCATCAAACGCATAGATTACAAATCACAAAGGTTCCAAATCTACGACACGAAAAACTGTCTTTCAAAACAATTATTAAAACTAAGAAACTTATCAGTTTCGCCGTTTCAGTTTCACTTCCATGAGTTTAATATACAGCGTAACGTTTCTTTCTTTCGTTGCGATTTGAATAAGGAGTGTTCGATTATGCAGCGTGAATTCAGTGGTGATTTTATTGATCCTGAGTTGGTTTCATGTAGAAAAGTGAGTGATGTTTTGAATGTGGGTTGGATGATTGAGGAATGGGAAGATGATGTTACTGAGAGTTTGATTATGGAATGGTCTAAACCAAATTGTAGTTTTTGTGAAGTTCAAGGGCAAAAATGTAAATGGAAGAATGGTACTAGAAATGGTGAAGTTGAATGTTTTGTTTGTAAATCAGATGGGATTGCAAGATCAATTGTTCTTCTAATTACTGCTGGGGTTATAGTTGGTTCCATGATTTTGCTTGTATTGGCAAATGGATTTCTTCGCATTTATTGTTATTTTAAGATGAAAGGAGACGACATAGCAAGGATAGAAAAGTTCTTAGAGGATTATAGAGCTATGAAACCTACAAGATTCTCTTATGCTGATATTAAGAGAATAACAAATGGTTTCAAGGAAAGTTTAGGAGAAGGAGCTCATGGAGCAGTGTTCAAAGGTATGCTCTCCCAAGAAATTCTTGTTGCTGTGAAGGTACTCAATGAAACACAAGGAGATGGAAACGATTTCATCAATGAAGTTGGAACAATGGGAAAAATTCATCATGTCAACGTTGTTCGTTTGCTCGGATTCTGCGCTGATGGATTCCACCGCGCTCTTGTCTATGATTTCTTTCCAAATGGCTCGTTGCAGAATTTTTTGGCGCCGCCGGAGAACAGGGATGTTTTTCTCGGTTGGGAAAAGTTGCAAAAAATTGCTCTTGGTGTTGCTAGAGGGATTGAGTATCTTCATATTGGTTGTGATCATAGAATACTTCATTTTGATATCAATCCCCACAATGTGTTAATAGATGATAATTTGATTTCTAAAATTACTGATTTTGGGCTTGCTAAATTGTGTCCGAAAAACCAAAGCACGATCTCTATGACTGCAGCTAGAGGAACATTGGGCTACATTGCACCTGAAGTTTTCTCAAGAAACTTCGGAAATGTTTCTTATAAATCTGATATTTATAGCTACGGAATGTTGTTGCTTGAGATGGTTGGGGGAAGAAAGAATACTAATATGTCGGCCGAGGAAACATTCCAGGTTTTGTACCCAGAATGGATTCATAATTTGATTGAAGGTAAAGATGTACGAGTTAATATTGAGGAGGAAGGAGATGTTAGAATTGCAAAGAAAATTGCGCTGGTCGGACTTTGGTGTATTCAATGGAATCCGGTCGATCGGCCATCCATGAAAACCGTGGTACAAATGCTTGAAGGTGATGGAGAAAAATTAATGGCACCCCCTACTCCTTTTGATTCTGTTGGTGCTAATAGACCAAATGAAGTTATTCAAACTAGACATCTAAATTTTGAGTTAGAAGTTATTCCTGAATTAGACTAA 1800 0.3628 MANFHNFSFLLILFFLLITKPVTSKNQCTKKCGNLQIQFPFNLKNNMNHTNPQGFELSCTNKDETILKFPTIPLQLFIKRIDYKSQRFQIYDTKNCLSKQLLKLRNLSVSPFQFHFHEFNIQRNVSFFRCDLNKECSIMQREFSGDFIDPELVSCRKVSDVLNVGWMIEEWEDDVTESLIMEWSKPNCSFCEVQGQKCKWKNGTRNGEVECFVCKSDGIARSIVLLITAGVIVGSMILLVLANGFLRIYCYFKMKGDDIARIEKFLEDYRAMKPTRFSYADIKRITNGFKESLGEGAHGAVFKGMLSQEILVAVKVLNETQGDGNDFINEVGTMGKIHHVNVVRLLGFCADGFHRALVYDFFPNGSLQNFLAPPENRDVFLGWEKLQKIALGVARGIEYLHIGCDHRILHFDINPHNVLIDDNLISKITDFGLAKLCPKNQSTISMTAARGTLGYIAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNTNMSAEETFQVLYPEWIHNLIEGKDVRVNIEEEGDVRIAKKIALVGLWCIQWNPVDRPSMKTVVQMLEGDGEKLMAPPTPFDSVGANRPNEVIQTRHLNFELEVIPELD* 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5177 599 ProSitePatterns Protein kinases ATP-binding region signature. 293 315 IPR017441 GO:0005524
Mal1g5177 599 Pfam Protein kinase domain 290 555 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g5177 599 ProSiteProfiles Protein kinase domain profile. 287 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g5177 599 Gene3D Transferase(Phosphotransferase) domain 1 362 565 - -
Mal1g5177 599 Gene3D Phosphorylase Kinase; domain 1 262 361 - -
Mal1g5177 599 PANTHER RUST RESISTANCE KINASE LR10-RELATED 43 598 IPR045874 GO:0004672
Mal1g5177 599 Pfam Wall-associated receptor kinase galacturonan-binding 28 92 IPR025287 GO:0030247
Mal1g5177 599 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 43 598 - -
Mal1g5177 599 SUPERFAMILY Protein kinase-like (PK-like) 269 558 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5177 Mal-Chr1 124420334 124422794 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5177 184 570 Receptor kinase-like Gene Family AT1G66910 44.361 3.35e-103 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mal1g5177 Pkinase 9.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5177 - - gmx:100819302 865.529