Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5173 ATGACAATCATTACAACACCTAGTGTTGGTATGGAATTTGACAGTGTAGATGAAGCTTGGAAATTTTGGCTTAATTATGGAAAAGAAATTGGTTTTGGAGTCAGAAAACAGTACTTTAATAAAAAGGGAGATGGGTCCATTAGATCGTGCAGATTTGTTTGTTGCAAGGAGGGTTATCGAGCGAAAGATAAAAGGTCATATTTGGTTAAGAACCCTAGAGCTGAAACAAGAATTGGTTGTGAAGCAAGAATCGCACTGTGTGTAAAGAATGAGAAATTTGTGATCCAAGAGTTCAAAGGGGACCATAACCACCCTTTACAACTTCCTGAAACAACACACATGCTAGCATCTCACCGTAAAATATCTGAAGTCCGAGCACATGAGATTGAAATGGCAGAGGACTGTGGATTGATGCAAAAATCTTCATTTCAGCTTATGAGTGCACATGCTGGAGGAAGAACTAATCTTGGATATACACCATTGGATGCTAGAAACTACCTCCAAGCAAAAAGACAACGAAGCATGGCGTATGGAGAAATTGGTTGTCTCATGGAGTATTTTCAAACTCAATCATTGGAGAATCCATCATTTTACCATGCATATCAAATGGATTGTGATGAACAAGTCACAAACGTGTTTTGGGCTGATGCAAAAATGATCTTAGACTATGGTTATTTTGGTGAGGTAGTTTCTTTGGATACAACATACTGCACCAATCGCGCTAATCGACCATTGGCATTGTTTTCAGGCTTCAACCACTATAGGGGTACAATCATTTTTGGAGCTGCCCTTTTGTATGATGAAACATCTGAGTCATTCAAATGGTTGTTCAAAACTTTTCCTGAAGCACATGGAAACAAAAAGCCGCGAACTTTGTTCACTGATCAAGACCAAGCAATGGCTAAAGCACTAGCAGAGGTAATTTCAGATACACGACATGGGTTATGCACATGGCACTTAATGCAGAATGGGATCAAACATCTTGGTTACTTGATGAAAAAAGAAAACCATTTCTTGACTTATTTTAAGAAGTGTATGTATGATTATGACCAAGAAGCAAGGTTTGAAGAAGCTTGGAGTAAATTGATTGTTGAATTTAATGTTCATGACAAGACGTGGGTGAAATCAATGTATGATATCAAGGAAAAATGGGCAGCATGTTACATGAAGGATGCATTCACGCTTGGAATGCGAAGTACTCAACTCAGCGAGAGTTTAAATTCAAATTTCAAGGCTTGCATGAAACCAAGAATTAATATCATTCAATTCTTGAAACACTTCGAGAGAGTTGTTGCGGAGAAACGATATAACGAGTCAAGATGTGAGTATGAGTCAAGACACAAACTACCAAGGATAAGATATGGACATTCACCAATTCTAATGCAACTCGCAGAGGTATACACTCATACAATTTTTGACTTATTCCATGATGAGTTCGATTTGTTTTTAGCTGCTTGCATAAGAGAACGAAATGTATCCCAACAGCCATTTGAATATATTATTGCTTTGGTCGGTAAGGAAGGAGAGTGGAAAGTACTATTTGATCCTATTCAATCCTCCATATCATGTAGCTGTAAAAAGTTTGAGACTTTTGGAATACTTTGTTGCCATGCTTTGAAGGTTTTTGAGGCGAATGATGTTAAAGTTGTCCCTGATCAATACATTTTAAAAAGGTGGACTAAAAATGCACGAAGTGGTATTATCTTTGATGTTAGGAGACATGAAGTTGTGGAAGATCCCAAATTATGTAGTATACAGCGATACAAGCAGCTTTGCTCTACTATGATTAAATTAGCAGCTGATGTGTCACCTTCCGATGATTTGTCCGAACTGGTACAGAATGGATTGCATGACCTGTGTAACAAAGTAAAGGAGGTTCGATTACAAAAAAATGCGAATGTTCATGATGAAGGCGAAGTCCCAACAATATCTGCTGAAAAAGTGACTCAACCAAAGGGATTTAAGAACCGAATTGGGTTAGCAAGGCGTAAGAGGGGAAAAAGTTGGATTGAACGTCAACCAACAACAAGAAAAGCTCCAACCATAACACCGTCTTTGAGTCAAAGATCTTAG 2073 0.3811 MTIITTPSVGMEFDSVDEAWKFWLNYGKEIGFGVRKQYFNKKGDGSIRSCRFVCCKEGYRAKDKRSYLVKNPRAETRIGCEARIALCVKNEKFVIQEFKGDHNHPLQLPETTHMLASHRKISEVRAHEIEMAEDCGLMQKSSFQLMSAHAGGRTNLGYTPLDARNYLQAKRQRSMAYGEIGCLMEYFQTQSLENPSFYHAYQMDCDEQVTNVFWADAKMILDYGYFGEVVSLDTTYCTNRANRPLALFSGFNHYRGTIIFGAALLYDETSESFKWLFKTFPEAHGNKKPRTLFTDQDQAMAKALAEVISDTRHGLCTWHLMQNGIKHLGYLMKKENHFLTYFKKCMYDYDQEARFEEAWSKLIVEFNVHDKTWVKSMYDIKEKWAACYMKDAFTLGMRSTQLSESLNSNFKACMKPRINIIQFLKHFERVVAEKRYNESRCEYESRHKLPRIRYGHSPILMQLAEVYTHTIFDLFHDEFDLFLAACIRERNVSQQPFEYIIALVGKEGEWKVLFDPIQSSISCSCKKFETFGILCCHALKVFEANDVKVVPDQYILKRWTKNARSGIIFDVRRHEVVEDPKLCSIQRYKQLCSTMIKLAADVSPSDDLSELVQNGLHDLCNKVKEVRLQKNANVHDEGEVPTISAEKVTQPKGFKNRIGLARRKRGKSWIERQPTTRKAPTITPSLSQRS* 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5173 690 Pfam MULE transposase domain 229 323 IPR018289 -
Mal1g5173 690 MobiDBLite consensus disorder prediction 663 690 - -
Mal1g5173 690 SMART 26again6 521 548 IPR006564 GO:0008270
Mal1g5173 690 Pfam FAR1 DNA-binding domain 21 107 IPR004330 -
Mal1g5173 690 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 6 632 IPR031052 GO:0006355
Mal1g5173 690 Pfam SWIM zinc finger 519 544 IPR007527 GO:0008270
Mal1g5173 690 ProSiteProfiles Zinc finger SWIM-type profile. 499 546 IPR007527 GO:0008270
Mal1g5173 690 PANTHER OS03G0181600 PROTEIN 6 632 - -
Mal1g5173 690 MobiDBLite consensus disorder prediction 674 690 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5173 Mal-Chr1 124313154 124315226 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal1g5173 MULE 1e-24 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5173 - - cam:101507984 816.224