Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5168 ATGGTTTCAATCTCCAAATTTGTGTTATCAGTTTCTATGTTACTAACTATTCTTGTTACTTTGCAGTTTAAGGATGGTAAAAGCGGTTTGTTTCTTAAAGACAAAGTACACATGTACATTACTAACAACTCAACCAATGGTCTTCAGCTCGGTGTCCATTGCCCTGGTACCTTACTAAAAACTACCTTATACCATTGTGGATTTACATGGAGTAATAGTAATGAATATCACCACTTTGACGTTTATGATCAGCATCGAGATGATAAAACTGTCAAAAGAGAATGTCATTGGGAAGTAAGTCAATCAGGACCATGTAGGCTTAATTATTGGGTAGTGCCTAACACCGTAGAATGCTTTGAATGGCCTTGA 369 0.3659 MVSISKFVLSVSMLLTILVTLQFKDGKSGLFLKDKVHMYITNNSTNGLQLGVHCPGTLLKTTLYHCGFTWSNSNEYHHFDVYDQHRDDKTVKRECHWEVSQSGPCRLNYWVVPNTVECFEWP* 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5168 122 PANTHER - 58 121 IPR010264 -
Mal1g5168 122 Pfam Plant self-incompatibility protein S1 59 121 IPR010264 -
Mal1g5168 122 PANTHER S-PROTEIN HOMOLOG 18-RELATED 58 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5168 Mal-Chr1 124260225 124260663 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5168 57 108 Carbohydrate Esterase AT3G16970 40.000 1.82e-09 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5168 - - mtr:MTR_6g004340 140.969