Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5167 ATGGAACTGAAGGTAATACTAGTGCTATTTTGTCAAATTTTAATGTTTGCAATAGCAATAGTATTATTACTAGTTGGAGATGTTAAAGCCCATGCTTCAGCTCTACCTGGATGCAAAAACACATGTGGAGATGTTGAAATTCCATATCCATTTGGAATTGGCAATTCATCAATACCAAATCAAGGATCATGTTTTTTGAAGCAGCCTATGTTTAAGGTCACATGTATAAACGATTCCAAATTATATTGGGGTGTTAATAGTGATAACATAAATACTTCTATACAAGTATCACACATAGACATATTCCAAGGTCAAATTGAGTTGTGGTTTTATGTTGGAAGGTATTGTAGTAAACGGAAGTATAATCGCCCATGGCTTCGATGGCCATCGCGTGGTTTTAGTATTTCAAGCAAGGAAAATAACTTCCTAACCGTTGGTTGCGACAGCTACGGCTATCTCAATAGCATTTACAACGGGGACACATACTCAACGGGTTGCATAACAAGATGCTACGGAAATAGGAGGAATATCAAAAATGGAACGTGTTCCGGTATTGGATGTTGTCAGGTGGATATTCCAAATAACATGAGGAATATCAGTATAGAAGCATCTTATTTCCCTAATTCAACAGAAAATTTAGGATGCAGCGTTTCTTTTGTTGTCAGACATGGATTCTACAATTTTTCTACTATTGATCTACATAATTTTCGTTACGATAGGGTCCCTTTAATTCTTGATTGGAGTGTAGGGAGAAATAAATGTAATGCTGCCAAGAGTGGAGTTGATTACGCTTGTAGGAACAATAGCTTTTGCGACGACAAAGACATTGATTATGGCTACCAATGCAAATGCAAGGAAGGTTATGAAGGAAACCCATACCATCCCGATGGATGCAAAGACATCGATGAATGTAAGACATCAAATCATACATGCATAGATGGAAATCATTGCCGCAATATCGATGCCTCTTACGAATGTTTTTGTCCGGAGGGTCAATCTGGAAAAGGAACAAAAGAAGGAGGGTGTCGTGGAGGAGATGTACTTGCAAAGGTCGCTATAGGAGCAAGTGCTGGTTTTATTATTCTATCTGTGGGGAGTTCAGCGTTGTACTTGATATATCAAAAAAGAAAACTCAAAAAATTAAAAGAGAAATTCTTTCAACAAAATGGTGGTTTCATTTTGTTACGAAAACTCTCTAGAAGAGAAGATACATCAGGAACTGCTCAAATATTCAAAGAAGATGAACTTAAGAAGGCAACCAACAACTTTGACGAGAGCTTAATTATTGGTCGAGGAGGTTTTGGTACAGTTTTCAAAGGAAATTTAGCAGACAATAGAATTGTTGCAATCAAGAAGTCCAAAATAATGGATGCTACCCAAGTGGAGCAATTCATTAACGAGGTAGTTGTTCTATCCCAAATAAATCATAGAAACGTTGTCAAACTCTTAGGATGCTGTTTAGAGACAGAAGTTCCGTTACTAGTCTATGAATTTGTTAGCAATGGTACCCTTTTCAATTTCATACACAATATAGATAAAACTAATAATGCAACTTGGAAGACGCGTTTAAGGATAGCAGCAGAAACCGCTGGAGCATTATCCTATTTACATTCAGCTGCATCAATACCAATTATTCATAGGGATGTTAAGAGTACCAACATTCTACTGGATGACAATTACACTGCAAAAGTGTCTGATTTTGGAGCTTCAAGATTGGTTCCGCTTGATCATACTAAGATAGCCACAGTGGTGCAAGGAACTCTTGGATACCTAGATCCAGAGTATATGCAAACACACCAATTAACCGATAAAAGTGATGTTTATAGCTTTGGTGTAGTTCTTGCAGAGCTCTTAACAGGGGAGAAACCTATTTCTTTTATGAGGCCAGAAGATAAAAGAAGTCTTGCTAATCACTTCCTATCTTTTTTAAGAGAGAATCACATGTTTGATGTTTTTCAAGTTGGCATCTTGAATGAAGAAAACAAGGAGGAAGTCAAGCAAGTTGCTATTCTTGCAGCAAAGTGCTTGAGACTTAAAGGAGAGGAAAGACCTAGCATGAAGGAAGTGGCTATGGAATTGGAGGGTATGAGGTTAGGGGCATCATCCAACATTAATTATGAAACTGGTGATAGCAGCAACCATGGATGTAGTGGGTATGACAGCTTGAAAGTTCATGCACCAATGTCCTTATAG 2193 0.3762 MELKVILVLFCQILMFAIAIVLLLVGDVKAHASALPGCKNTCGDVEIPYPFGIGNSSIPNQGSCFLKQPMFKVTCINDSKLYWGVNSDNINTSIQVSHIDIFQGQIELWFYVGRYCSKRKYNRPWLRWPSRGFSISSKENNFLTVGCDSYGYLNSIYNGDTYSTGCITRCYGNRRNIKNGTCSGIGCCQVDIPNNMRNISIEASYFPNSTENLGCSVSFVVRHGFYNFSTIDLHNFRYDRVPLILDWSVGRNKCNAAKSGVDYACRNNSFCDDKDIDYGYQCKCKEGYEGNPYHPDGCKDIDECKTSNHTCIDGNHCRNIDASYECFCPEGQSGKGTKEGGCRGGDVLAKVAIGASAGFIILSVGSSALYLIYQKRKLKKLKEKFFQQNGGFILLRKLSRREDTSGTAQIFKEDELKKATNNFDESLIIGRGGFGTVFKGNLADNRIVAIKKSKIMDATQVEQFINEVVVLSQINHRNVVKLLGCCLETEVPLLVYEFVSNGTLFNFIHNIDKTNNATWKTRLRIAAETAGALSYLHSAASIPIIHRDVKSTNILLDDNYTAKVSDFGASRLVPLDHTKIATVVQGTLGYLDPEYMQTHQLTDKSDVYSFGVVLAELLTGEKPISFMRPEDKRSLANHFLSFLRENHMFDVFQVGILNEENKEEVKQVAILAAKCLRLKGEERPSMKEVAMELEGMRLGASSNINYETGDSSNHGCSGYDSLKVHAPMSL* 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5167 730 Gene3D Laminin 251 342 - -
Mal1g5167 730 SUPERFAMILY Protein kinase-like (PK-like) 405 693 IPR011009 -
Mal1g5167 730 SMART egfca_6 300 343 IPR001881 GO:0005509
Mal1g5167 730 SMART egf_5 253 299 IPR000742 -
Mal1g5167 730 SMART egf_5 303 343 IPR000742 -
Mal1g5167 730 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 29 698 IPR045274 GO:0007166
Mal1g5167 730 ProSitePatterns Protein kinases ATP-binding region signature. 429 452 IPR017441 GO:0005524
Mal1g5167 730 SUPERFAMILY EGF/Laminin 300 335 - -
Mal1g5167 730 ProSitePatterns Calcium-binding EGF-like domain signature. 300 326 IPR018097 GO:0005509
Mal1g5167 730 Gene3D Transferase(Phosphotransferase) domain 1 499 713 - -
Mal1g5167 730 Pfam Calcium-binding EGF domain 300 339 IPR001881 GO:0005509
Mal1g5167 730 Pfam Wall-associated receptor kinase galacturonan-binding 38 105 IPR025287 GO:0030247
Mal1g5167 730 CDD STKc_IRAK 429 696 - -
Mal1g5167 730 Pfam Protein kinase domain 427 689 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g5167 730 ProSitePatterns Serine/Threonine protein kinases active-site signature. 544 556 IPR008271 GO:0004672|GO:0006468
Mal1g5167 730 Pfam Wall-associated kinase 180 285 IPR013695 GO:0004674|GO:0016021
Mal1g5167 730 ProSiteProfiles Protein kinase domain profile. 423 698 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g5167 730 Gene3D Phosphorylase Kinase; domain 1 395 498 - -
Mal1g5167 730 PANTHER WALL-ASSOCIATED RECEPTOR KINASE 2-LIKE ISOFORM X2 29 698 - -
Mal1g5167 730 ProSiteProfiles EGF-like domain profile. 300 338 IPR000742 -
Mal1g5167 730 SMART serkin_6 423 696 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g5167 730 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 317 328 IPR000152 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5167 Mal-Chr1 124148250 124158350 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5167 15 703 Receptor kinase-like Gene Family AT1G21230 44.051 0.0 561
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Mal1g5167 Pkinase 2.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5167 - - gmx:100778914 913.294