Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5163 ATGATGAAGAAACAAGCTCCATTTTCTTCATCATATTTACAAACACTAGTATTAATATTTGCTTCAATCCTTCTACTTTTTCATCAAAATTGTCTAGCTAAGCATCACCACCAACCATGTCCAACTTCATCATGCGGCAAAATTCACAACATAACACATCCATTTCGTCTCAGAACCGATCCAAACCACTGCGGAGACACAAGGTACGAGTTAGATTGCAACGAAAATGGTCCATCATTAACTATGTTCTCAGGAAAATACTACGTACAACACATAGATTACAAGAGATTTAAAATTCTATTAAGTGACGCAGGTGCGGTTGAAGACACTAATTGCTCTTTTATCCCACGGTACTTTTTATATGATCGAAGTTTCAATAATGTTCTTTTTGGTGAAGATAACTTTGGATCTGAACCGTTCATTCTGGATCCAATAAATCCAACGAGAGTAGCGTATTTCAATTGTTCTAATCGAATAAAAGATCCACGGTACGTTAAGGTGGACACGAGTCGTTGTAGCACACATGGGAATAGTAGTACTAATCATGTGTATGCTGTTTTGGAACCATCATTGTTTGAGTATCGTGTTGAGGATATTAAGGTTGGGTGTTATTTTATGGTGGCTACCTTGGCTAAGGCGCGGTCGGAGATTGTGGAGGGCAAGGTTTCATATGATGAGATTCATAAGATGATAGTTGATGGAGTTGAGGTTTCATGGTTGCCTGTGGTTTGTGAAGATAGATGTGGAAAGGGATCAAGTTGTAAGGTTGCTGATGAAGAAAGTGGAGAAGTTCAATGTGATATGCAATTATGTCATTATGCTTACCAAACAACTGATAAATGCGAACTTCAGGACAAGATATTTGGTTATACTCGTGCTTATCTTAGAGGCATTTTTATTGGACTTGGAAGTAGAATCACATTTAGCACAAGACAATTGGACAATCCAGTTGGACTAGAATATTTTGATGGAGGAATATTCATAGGAAGAAATGTTATACCATTATTCATAGGAGCCAGATTTCTATTTGGAGTTATAGTTCTACTTGTGCTATTTATCTATAAATGGAGAAGGAGACATTTATCAATGTATGATAACATTGAAAACTTTTTGCTAGAAAGCAATCTAAACCCAATTAGGTATGAATACAAAGAAATCAAGAAAATGACTGGAGGTTTCAGAGTGAAATTAGGTCAAGGAGGTTTTGGTGCTGTATACAAAGGAAAGCTAAGAAGTGGGCCTGATGTTGCGATAAAGATGTTGACAAAATCCAATGTTAATAATGGACAAGATTTTATCAATGAAGTTGCGACCATTGGAAGAATATATCATGTTAATGTTGTACGTCTTGTTGGATACTGTGTTGAAGGAAAAAAGAGTGCGCTTGTTTACGAATTCATGCCGAATGGGTCATTGGATAAGTACATTTTCCCTAAAGAAGGAATTGACCCTTTGAGTTACGAGAAAATATATGAAATATCTCTCGGAATAGCTTGTGGGATAGAATATCTGCATCAAGGTTGTGATATGCAAATTCTACATTTTGATATCAAGCCTCATAATATTCTTCTAGATGAAGATTTCGTTCCAAAGGTTTCGGATTTTGGACTTGCAAAGCTATATCCTGTGAACGATAGCATTGTTCCGTTAACTGCGGCAAGAGGAACTTTGGGTTACATGGCTCCTGAATTGTTCTACAAAAATATCGGTGGAGTGTCTTACAAGGCTGATGTATATAGCTTTGGAATGCTTTTGATGGAAATGGCAGGTAAGAGGAAGAACTCTGATCCTAACGCAGCGCATTCGAGTCAGCATTACTTCCCCTTTTGGATTTACGATCAATTTAAAGAAGAGAGAGATATTGAAATAATGGAAGATGTCTCCGAAGAGGGATTGACAGTAGCTAAAAAAATGTTCATGGTTGCACTTTGGTGTATTCAGTTGAAACCGAGTGATCGTCCTTCAATGAAAAAAGTAGTTGAGATGCTTGAAGGGAAAACTGAAAGCCTTGAATTGCCTCCAAGGCCTTCTTTTTATGCAAATGAAAATTATAAACATCGTGATGAAATCAGCTCTGATCATACATCATGGGGTGATTCCACTAACATTAGCCAAATCTCAACTAATTATTCATCGGAAAATTGCTCTTGA 2151 0.3701 MMKKQAPFSSSYLQTLVLIFASILLLFHQNCLAKHHHQPCPTSSCGKIHNITHPFRLRTDPNHCGDTRYELDCNENGPSLTMFSGKYYVQHIDYKRFKILLSDAGAVEDTNCSFIPRYFLYDRSFNNVLFGEDNFGSEPFILDPINPTRVAYFNCSNRIKDPRYVKVDTSRCSTHGNSSTNHVYAVLEPSLFEYRVEDIKVGCYFMVATLAKARSEIVEGKVSYDEIHKMIVDGVEVSWLPVVCEDRCGKGSSCKVADEESGEVQCDMQLCHYAYQTTDKCELQDKIFGYTRAYLRGIFIGLGSRITFSTRQLDNPVGLEYFDGGIFIGRNVIPLFIGARFLFGVIVLLVLFIYKWRRRHLSMYDNIENFLLESNLNPIRYEYKEIKKMTGGFRVKLGQGGFGAVYKGKLRSGPDVAIKMLTKSNVNNGQDFINEVATIGRIYHVNVVRLVGYCVEGKKSALVYEFMPNGSLDKYIFPKEGIDPLSYEKIYEISLGIACGIEYLHQGCDMQILHFDIKPHNILLDEDFVPKVSDFGLAKLYPVNDSIVPLTAARGTLGYMAPELFYKNIGGVSYKADVYSFGMLLMEMAGKRKNSDPNAAHSSQHYFPFWIYDQFKEERDIEIMEDVSEEGLTVAKKMFMVALWCIQLKPSDRPSMKKVVEMLEGKTESLELPPRPSFYANENYKHRDEISSDHTSWGDSTNISQISTNYSSENCS* 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5163 716 Pfam Wall-associated receptor kinase galacturonan-binding 40 103 IPR025287 GO:0030247
Mal1g5163 716 PANTHER RUST RESISTANCE KINASE LR10-RELATED 8 696 IPR045874 GO:0004672
Mal1g5163 716 Gene3D Phosphorylase Kinase; domain 1 368 466 - -
Mal1g5163 716 MobiDBLite consensus disorder prediction 690 716 - -
Mal1g5163 716 Pfam Protein kinase domain 396 661 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g5163 716 SUPERFAMILY Protein kinase-like (PK-like) 381 693 IPR011009 -
Mal1g5163 716 MobiDBLite consensus disorder prediction 695 716 - -
Mal1g5163 716 Gene3D Transferase(Phosphotransferase) domain 1 467 672 - -
Mal1g5163 716 SMART serkin_6 391 663 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g5163 716 ProSiteProfiles Protein kinase domain profile. 391 678 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g5163 716 CDD STKc_IRAK 397 665 - -
Mal1g5163 716 ProSitePatterns Serine/Threonine protein kinases active-site signature. 512 524 IPR008271 GO:0004672|GO:0006468
Mal1g5163 716 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 8 696 - -
Mal1g5163 716 ProSitePatterns Protein kinases ATP-binding region signature. 397 419 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5163 Mal-Chr1 124058433 124061541 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5163 330 708 Receptor kinase-like Gene Family AT4G18250 44.186 2.23e-103 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mal1g5163 Pkinase 1.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5163 - - gmx:100820366 1014.22