Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5161 ATGGACTCAGTATTTGGTTGTTCCATTTCAACATCAGTCATCAGCATAGGAATGAAATCATATTTATGGTTCCTAGTTTTTGTTTTTGTGCTGTTGCTTCATAATCATCATGAAACATGTGATGCAATTACAAATACTAGTAACCAAACATATTGTCCACCTTCTTCATGTGGCAAAATCACAAACATAAAACATCCATTCCGACTTAAGAATGATCCAACAATCTGTGGTGATCCGAGGTACGAGTTATCCTGCGAAAACAACATCACAACCTTAACTTTGTTCTCGGGTAAATTCTCTGTTAAATCAATCAACTACAACAACTACACAATTCAACTAGTTGATCCTGGAATTCAAGAAGGTGATTGCTCCACCATTCCTCGCTATTTCTTTACCAAATCCAATTTCACAAGTTCTTACAATAATAACTACCACGGGGATCCGTACGAATTTGATGGCGGTCTAACTCGGATTTGGCCCGTGATATACTTGAACTGTAGCAAGCCAGTAAAGAACAATTCTTTGTATGTGGATACATCTTCGTGTAGAATCAACTCCACAAATAACAGCTATGTTTATGCAATTGCTCGGGACTTGGCTGTTGGTAATTTTAATGTTGGTTGCCGTGTGATGCTTGTTACTATGTCATCAGCTCCAGCTTTGTTCCCGAAGCCTTATACTACAATCACTCGACAAAATTTTACCTATTCGGAAATTCATGAAATCATAAGCTATGGATTTGAACTTTCGTGGACGAACCGTGCTTGTGAAGATTCTTGTAACGTTAACTTACAGTACTGCTCCTTCAATTACGACACCGGAGGTCTTCAATGTGCAGATCAAGATTACTGCTCAACTCCACTGGGAGCTGACATCAATTGTGATGTTATAGTCGGCTTTGTTAAAGGACTACAACAAATAGTCGGCACGAAAAAAGTTTCAAAATTATCAGGTGGAAATTTTGATTTATCCAACAAAGTTACTGATTCAAAAATTGGCATCGAAATAGGAAGAATAAGTGGAAGGTATCTCTTGCCATCCTTTACAATAAGATTTACATTGGGCCTTGTGACTTTCTTTGTGATATTGATATATACATGTCGAAGAAGACATATATCAATATACGAAAATATTGAAGTTTTTCTTAGAGGTAGTACAATGATGCCAAGGAGGTACTCCTACAAAGATTTGAAAAAGATGACTCAAAGTTTCAAAGACAAACTAGGTGAAGGAGGTTTTGGTTCTGTTTATAAAGGAAAGATAAGCAGTGGACCATTTGTAGCCATAAAGATGTTGGGAAAATCTAAGGGTAATGGACAAGATTTCATTAATGAAGTTGCAACCATAGGAAGAATACATCATGCAAATGTGGTGAGACTTATTGGTTTTTGTTTTGAGAGATCGAAACATGCTCTTGTTTATGAATTCATGCCCAATGGCTCTCTTGATAAATATATTTCTACTAAAGAGGATGTTATCCCCCTAACTTCTAAGAAAATGTATGAGATATCACTTGGAGTTGCTCGTGGAATTGCTTATTTGCATCAAGGCTGTGACATGCAAATCTTACATTTTGATATCAAACCTCATAACATCCTTCTTGACGAGAACTTTATCCCCAAGGTTTCGGACTTTGGTCTTGCAAAGCTCTACCCTAATGACAATAGTATTGTCCCTTTAACTGCAGCAAGAGGAACAATTGGTTATATGGCTCCTGAGTTGTTCTACAAAAATATTGGAGGAGTTTCGTACAAGGCTGATGTGTATAGTTTTGGTATGCTTTTAATGGAAATGGCAAGTAAGAAAAGAAATTTAAATCCGCATGCCGATCGTTCAAGTCAAATTTTCTTTCCCATTTGGATTTATGATCAATTGATTGAAGAAAGAGAGATAGAGATGGATGAAATTACTGATGATGAAAAAAGTAATGTGAAGAAAATGTTCATCATCGCATTATGGTGTATACAGTTAAAACCAAGTGATCGACCTTCAATGAACAAAGTAATTGAGATGCTGGAAGGAAATATTGAGAATATTGAAATGCCTCCGAAACCTTTATTGTATCCAAATGAAATGATTCAGGAAGACCTCGACGTCAACTCTAATGAAATTGAATCAGACTCAGTTAGTCTCATTGAGGAAGATGCAACAGAGCCCTTATTGATGAATTCTGCTTGA 2178 0.3655 MDSVFGCSISTSVISIGMKSYLWFLVFVFVLLLHNHHETCDAITNTSNQTYCPPSSCGKITNIKHPFRLKNDPTICGDPRYELSCENNITTLTLFSGKFSVKSINYNNYTIQLVDPGIQEGDCSTIPRYFFTKSNFTSSYNNNYHGDPYEFDGGLTRIWPVIYLNCSKPVKNNSLYVDTSSCRINSTNNSYVYAIARDLAVGNFNVGCRVMLVTMSSAPALFPKPYTTITRQNFTYSEIHEIISYGFELSWTNRACEDSCNVNLQYCSFNYDTGGLQCADQDYCSTPLGADINCDVIVGFVKGLQQIVGTKKVSKLSGGNFDLSNKVTDSKIGIEIGRISGRYLLPSFTIRFTLGLVTFFVILIYTCRRRHISIYENIEVFLRGSTMMPRRYSYKDLKKMTQSFKDKLGEGGFGSVYKGKISSGPFVAIKMLGKSKGNGQDFINEVATIGRIHHANVVRLIGFCFERSKHALVYEFMPNGSLDKYISTKEDVIPLTSKKMYEISLGVARGIAYLHQGCDMQILHFDIKPHNILLDENFIPKVSDFGLAKLYPNDNSIVPLTAARGTIGYMAPELFYKNIGGVSYKADVYSFGMLLMEMASKKRNLNPHADRSSQIFFPIWIYDQLIEEREIEMDEITDDEKSNVKKMFIIALWCIQLKPSDRPSMNKVIEMLEGNIENIEMPPKPLLYPNEMIQEDLDVNSNEIESDSVSLIEEDATEPLLMNSA* 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5161 725 PANTHER RUST RESISTANCE KINASE LR10-RELATED 19 702 IPR045874 GO:0004672
Mal1g5161 725 SMART serkin_6 402 672 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g5161 725 Gene3D Transferase(Phosphotransferase) domain 1 477 682 - -
Mal1g5161 725 Pfam Wall-associated receptor kinase galacturonan-binding 52 115 IPR025287 GO:0030247
Mal1g5161 725 ProSitePatterns Serine/Threonine protein kinases active-site signature. 522 534 IPR008271 GO:0004672|GO:0006468
Mal1g5161 725 SUPERFAMILY Protein kinase-like (PK-like) 386 673 IPR011009 -
Mal1g5161 725 Gene3D Phosphorylase Kinase; domain 1 379 476 - -
Mal1g5161 725 ProSitePatterns Protein kinases ATP-binding region signature. 408 430 IPR017441 GO:0005524
Mal1g5161 725 CDD STKc_IRAK 408 674 - -
Mal1g5161 725 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 19 702 - -
Mal1g5161 725 Pfam Protein kinase domain 405 670 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g5161 725 ProSiteProfiles Protein kinase domain profile. 402 687 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5161 Mal-Chr1 124003019 124008994 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5161 49 688 Receptor kinase-like Gene Family AT5G38260 35.000 7.05e-110 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mal1g5161 Pkinase 1.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5161 - - mtr:MTR_1g027830 1000.73