Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5160 ATGGTTTCAGCCTCTATTTTTGGAGGACCAGCCAGATGTGTGATAATGTTTCTATACTTGCTTCTACTTCCAAACAAAACTTATTCACAACCTTGTTCTTCTTCCTGTGGAAAAATTTCCAACATAACTTATCCTTTCAGATTAAAACACGACCCAAACCACTGTGGCAACAATAAGTACGAGTTGGATTGTGTGAACAACGTTACAATATTGAAGTTGTATGATGCTTATTATTTGGTACAATCAATCAATTACAACAATTACACAATACGAGTTGTTGACCCAAACATTCAACCCACCAATTGCTCCTCTCTTCCTCGCTTCTTCTTGTATCACCACAATTTCACTGATTATGATTCATACCAATACACAGTAGAGAGATCGAGTTCACCTAGTAACAATGAAATTTATTTCGATGAAATTGATTTATCTATGCCTGTAATTTACATGAAGTGTACAAGTCCACCTAGTAACCTTGTGGATAGGTATTATGCGAACACTTCTTCATGTGTGGATCAACACACATATGTTATTGTTGGGGACCCACAATTTCGAATATTGGAGCCTCAATGTCGTGTTAAGCTAGTTACCCTCACATCCTTCTGGGGACATCCATCTGCTTATCCTTACCGAAACAAACTTAAAGGTAACGTTTCGTACATCGATATTCATAAGGCACTAGGCTATGGATTTGAAGTTTCCTGGACGCAAGCATCTTGTCCTTGTGATCAATGCTACCTCAAGTTTTCTACTGGCGAGATTAAGTGTTCCTACCAAGGACATTGGTGGATATATCTGGTCGACCGTCTGTTGGGACTTCGTGAGCTGGCAGGCATGAATAGGTCTTTGGCATATATTAATTATTATTATGCAAGCGAAGTTGGAATGTTTACAGGAAAGTATGTTCTGCCATACATTACACTTAGAATTATGTTGGGCATCATACTTTTCTGTGTGTTGTTGATCTATACATATCGAAGAAGACATGCATCAATATATGAAAGTATTGAAAATTTTCTGCAAGGTAATACTCTCATGCCAATAAGGTATTCATACAAAGAAATAAAGCAAATGACAAAAAAATTCAAGGTAAAATTGGGTGAAGGAGGTTATGGAGATGTCTATAGAGGAAATCTAATAAGTGGGCCATTTGTAGCCATAAAGATGTTGAAAATTAAATCAAAAACTAATGGGCAAGATTTCATAAGTGAAGTTGCAACCATAGGAAGGATATATCATTCAAATGTGGTAAAACTCGTTGGATTTTGTGTCGAAGGATCAAAACGCGCTCTTGTTTATGAGTACATGCCCAATGGCTCACTTGATAAATATATTTTCAACAAAGAGGGAGATATATCTTTAACTAACAACCAAATATATGAGATATCTCTTGGAGTGGCTCGTGGAATTTCTTATCTTCACCAAGGTTGTGATATGCAAATTTTGCATTTTGATATTAAGCCTCATAACATCCTTCTTGACGAAAACTTCATACCCAAAGTTTCAGACTTCGGTCTTGCAAAGCTTTATCCTGCTGACAATAGCATTGTCACATTGACAGCAGCAAGAGGAACAATTGGTTACATGGCTCCTGAATTGTTCTACCAAAATATCGGTGGAATATCATACAAGGCTGATGTGTATAGCTTTGGAATGCTTTTGATTGAAATGGCAAGTAGGAGAAGAAATTTGAATACACATGTTGAGCATTCAAGTCAACTTTACTTTCCCTTTTGGATTTATGATCATTTGTTTGAAAATAGGGAGAGAAAAATGGAAGATGTGATCGTAGAAGAAATTAATGATGTTTTGAAGAAAATGTTCCTAGTTGCACTTTGGTGCATACAGTTGAAACCCATTGATCGTCCTTCAATGAATAAAGTAGTGGAGATGCTTGAAGGAGATATTGAAAATATTGAAATGCCTCCAAAGCCTTTACTATATCCACATGAAACAATTCAAGAGAATCTTGATATCAACTCAAATGAAACTGAATTTGATACTGGCTCTACCAGTTATGTGGAGGAAAATGCAACCACATAA 2043 0.3637 MVSASIFGGPARCVIMFLYLLLLPNKTYSQPCSSSCGKISNITYPFRLKHDPNHCGNNKYELDCVNNVTILKLYDAYYLVQSINYNNYTIRVVDPNIQPTNCSSLPRFFLYHHNFTDYDSYQYTVERSSSPSNNEIYFDEIDLSMPVIYMKCTSPPSNLVDRYYANTSSCVDQHTYVIVGDPQFRILEPQCRVKLVTLTSFWGHPSAYPYRNKLKGNVSYIDIHKALGYGFEVSWTQASCPCDQCYLKFSTGEIKCSYQGHWWIYLVDRLLGLRELAGMNRSLAYINYYYASEVGMFTGKYVLPYITLRIMLGIILFCVLLIYTYRRRHASIYESIENFLQGNTLMPIRYSYKEIKQMTKKFKVKLGEGGYGDVYRGNLISGPFVAIKMLKIKSKTNGQDFISEVATIGRIYHSNVVKLVGFCVEGSKRALVYEYMPNGSLDKYIFNKEGDISLTNNQIYEISLGVARGISYLHQGCDMQILHFDIKPHNILLDENFIPKVSDFGLAKLYPADNSIVTLTAARGTIGYMAPELFYQNIGGISYKADVYSFGMLLIEMASRRRNLNTHVEHSSQLYFPFWIYDHLFENRERKMEDVIVEEINDVLKKMFLVALWCIQLKPIDRPSMNKVVEMLEGDIENIEMPPKPLLYPHETIQENLDINSNETEFDTGSTSYVEENATT* 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5160 680 Gene3D Transferase(Phosphotransferase) domain 1 436 641 - -
Mal1g5160 680 Pfam Protein kinase domain 363 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g5160 680 SUPERFAMILY Protein kinase-like (PK-like) 345 633 IPR011009 -
Mal1g5160 680 ProSitePatterns Protein kinases ATP-binding region signature. 366 388 IPR017441 GO:0005524
Mal1g5160 680 Gene3D Phosphorylase Kinase; domain 1 337 435 - -
Mal1g5160 680 ProSiteProfiles Protein kinase domain profile. 360 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g5160 680 ProSitePatterns Serine/Threonine protein kinases active-site signature. 481 493 IPR008271 GO:0004672|GO:0006468
Mal1g5160 680 Pfam Wall-associated receptor kinase galacturonan-binding 32 94 IPR025287 GO:0030247
Mal1g5160 680 SMART serkin_6 360 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g5160 680 PANTHER RUST RESISTANCE KINASE LR10-RELATED 23 662 IPR045874 GO:0004672
Mal1g5160 680 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 23 662 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5160 Mal-Chr1 123942360 123998829 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5160 1 672 Receptor kinase-like Gene Family AT5G38260 33.809 3.74e-108 339
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mal1g5160 Pkinase 4.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5160 - - cam:101508554 1021.54