Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5156 ATGTGGGGTAATTACTCTACACTAGTTCTTCAATTCTTATGCTTCTTATTGAGTGTAAATTACTACACTAACCTTGCTTCAAGTGATATTCAATGCATGAAAACAAGGTGTAATCACAAAGATGCTCCTACTATTCAATACCCTTTTAGACTTCAAAACATTCAACAACAAAATTGTGGCAAAATTGGATTTGATCTTTCATGCAATGAGAATCACCAAACCATACTAGAATTTCCAAATTCAATCAATTTTGTTGTAAACAAAATTGATTACAAATCCCAAACAATTCATGTAACTGACCCAAATGCATGTCTTCCAAAACTCTTTTCAAATCTCAATGTATCATCCACTCCTTTTCATTTTGTTGACAATTCAAATTCCAATTATACTCTCTTCAATTGTTCATCCATGAACACTGCTTTACAATCTTATTATTCTTCCATTAAGTGTCTTTCTTCTAATGGATACCAAGTCTATGCCTTGAACTCTACACTTCAATTAAAGGATGTTACTTTGACATATTGTACCAAGTTGTTTGACTTGTCTTTTGTTCCAAAAGATGTTGTTTTTGGCCATGGTGATGATCTTATTTTAGGTTGGCATACAACTTGTGGCAATGAAAGTGAAACAGAACATGAATGTTACAACAATGTCAACAGATCCAAAGGAGCAGGGAAAAAAGTGGAGATTCTAGTACCAATACTATCATGTCTTGGAATTTTACTACTAGTCACTGTACTATACCATGTTCGATATAGAACTCAAAAAGATAAAGAAAATGAAGCAAGAATAGAGAAGTTCTTAGAAGATTATAGAGCATTGAAACCTACAAGGTATTGCTATTCAGACATAAAGAGGATCACAAACAATTTCAAGAATGAACTTGGGCAAGGAGCATACGGAACGGTGTACAAAGGTAAACTATCTAGCGACATATATGTCGCGGTTAAGCTTCTCAAAACCTCCACAGGAAACGGACCTGAGTTCATCAATGAAGTAGGAACAATGAGTCAAATTCATCATGTCAATGTTGTTCACTTAGTTGGATTTTGTGCGGATGGACACACGCGAGCTTTGGTGTACGAGTATTTACCAAATGGTTCGTTGCAGAAATTCATTTCCACAACGGATTTCAAAAATCATTTTTTGAGTTGGGAGAAATTACAAGAAATTGCGCTTGGAATAGCGAAAGGAATTGAGTATCTTCACCAAGGATGTGATCAGAGGATACTTCACTTCGATATAAAACCGCACAATATTTTACTTGACAATAATTTCACTCCTAAGATATCTGATTTTGGTTTGGCTAAGCTTTGTTCGAAGGATCAAAGTGCGGTTTCCATGACCGCGGCTAGGGGGACTATTGGTTACATAGCCCCGGAAGTATTTTCTAGGAACTTTGGGAATGTGTCGTATAAGTCTGATGTATATAGTTTTGGAATGTTGTTGCTTGAGATGGTCGGAGGAAGACAAAATACTGATGTTGTAGAGAAGAGAAGTGGTTTAGGTTATTTTCCGGAATGGATTTATAATTTGTTAGAGCAAGGGGATGATTTAAGCGAACATATTGAGGTGGAGAAATACGCGAAAATAGCGAAGAAACTTGCGATTGCTGGACTTTGGTGTATTCAATGGCACCCGGTCGATCGTCCTTCTATGCAAGTTGTTGTTCATATGCTGGAAGGAGATGGAGAAAAGTTAAGTATGCCACCAAATCCATTTACTTCAGCTGATCCTGCTATAATGAATGTGAGTTTAATTGGAAGGCACCTTCATAGAGAGCAATGA 1788 0.3647 MWGNYSTLVLQFLCFLLSVNYYTNLASSDIQCMKTRCNHKDAPTIQYPFRLQNIQQQNCGKIGFDLSCNENHQTILEFPNSINFVVNKIDYKSQTIHVTDPNACLPKLFSNLNVSSTPFHFVDNSNSNYTLFNCSSMNTALQSYYSSIKCLSSNGYQVYALNSTLQLKDVTLTYCTKLFDLSFVPKDVVFGHGDDLILGWHTTCGNESETEHECYNNVNRSKGAGKKVEILVPILSCLGILLLVTVLYHVRYRTQKDKENEARIEKFLEDYRALKPTRYCYSDIKRITNNFKNELGQGAYGTVYKGKLSSDIYVAVKLLKTSTGNGPEFINEVGTMSQIHHVNVVHLVGFCADGHTRALVYEYLPNGSLQKFISTTDFKNHFLSWEKLQEIALGIAKGIEYLHQGCDQRILHFDIKPHNILLDNNFTPKISDFGLAKLCSKDQSAVSMTAARGTIGYIAPEVFSRNFGNVSYKSDVYSFGMLLLEMVGGRQNTDVVEKRSGLGYFPEWIYNLLEQGDDLSEHIEVEKYAKIAKKLAIAGLWCIQWHPVDRPSMQVVVHMLEGDGEKLSMPPNPFTSADPAIMNVSLIGRHLHREQ* 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5156 595 Gene3D Transferase(Phosphotransferase) domain 1 364 569 - -
Mal1g5156 595 SMART serkin_6 289 560 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g5156 595 PANTHER RECEPTOR-LIKE KINASE 26 589 - -
Mal1g5156 595 Pfam Protein tyrosine and serine/threonine kinase 291 560 IPR001245 GO:0004672|GO:0006468
Mal1g5156 595 ProSiteProfiles Protein kinase domain profile. 289 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g5156 595 Pfam Wall-associated receptor kinase galacturonan-binding 32 100 IPR025287 GO:0030247
Mal1g5156 595 SUPERFAMILY Protein kinase-like (PK-like) 273 561 IPR011009 -
Mal1g5156 595 ProSitePatterns Protein kinases ATP-binding region signature. 295 317 IPR017441 GO:0005524
Mal1g5156 595 ProSitePatterns Serine/Threonine protein kinases active-site signature. 410 422 IPR008271 GO:0004672|GO:0006468
Mal1g5156 595 PANTHER RUST RESISTANCE KINASE LR10-RELATED 26 589 IPR045874 GO:0004672
Mal1g5156 595 Gene3D Phosphorylase Kinase; domain 1 262 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5156 Mal-Chr1 123832361 123835006 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5156 217 579 Receptor kinase-like Gene Family AT1G66910 47.721 5.95e-112 347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mal1g5156 PK_Tyr_Ser-Thr 1.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5156 - - zju:107414589 665.996