Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5150 ATGGGTACTTTTCAGCAAGAGAAATTTGTTAGGTTTCGGGATTCTAATTCAGAGGTTTCTAAGAGAAATTATCCTGCATTTAAGACAACACAGTCGGGGAGATTTAGAAGTACAATAAGTTCATTTTCTGAGAAGTTTCAAAGAGGACTTGAATCTGGTTCTGAGAGGATAAAGAGGTTCAGAACAACATTCGACCATTATCACTATGACAATGCTCTTTCTCGAAATTTTGGTTCTAAAAGGAAAATCCTCGATCCGCAGGGTACATTCCTTCAAAAGTGGAACAAGATATTTGTCTTGTTATGCGTTATTGCGGTATCATTGGATCCTTTGTTCTTTTATGTCCCTGTGATTGATGGTGAAAATAAATGCCTTTCATTGGACAGAGGGATGGAGATTGCAGCCACCTTTTTGAGAACTTTCTCTGATGTTTTTTATATAATCCACATGATTTTCCAGTTTCGTACTGGATTCATTGCTCCTTCTTCTCGAGTATTTGGAAGAGGTGTTTTGGTCGAAGATTCTTGGATAATTGCTAAGAGATATCTGTCATCATATTTCTTAGTTGACGTACTTGCAGTTCTTCCCCTCCCACAGGTGGTGATTCTAGTTATCATCCCAAAGATGAGCGGCTTTAAATCACTCAATACAAAGAACTTGCTGAAAGTTGTTGTTATCTTCCAATATGTGCCTCGTTTATTACGTATAATTCCATTATATAAAGAAGTTACAAGAACATCTGGCATTCTCACTGAAACAGCTTGGGCGGGAGCTGCATTCAATCTGTTACTTTACATGCTTGCAAGTCATGTCCTTGGTGCCTTTTGGTACTTGTTTTCTATAGAACGAGAAACCACATGCTGGAAAGAAGCGTGTCGAAATAATGATTTGTGTAACAAGGCAGATATGTATTGTAATCCTCGGGGAGGGTTTAAGTATATTTCGAAATTCTTGAATGATTCTTGCCCGATACAGGAGGAAGATAAAAAACTATTTGATTTTGGAATTTTCCTTGATGCTCTTCAATCCGGTATTGTGGAGTCAAGAGATTTTCCCCAAAAACTCTTCTACTGTTTTTGGTGGGGCCTAAAAAATTTAAGTTCACTTGGTCAGAACCTGGCAACAAGTACCGATTTTTGGGAAATCTGTTTTGCAGTTTTCATTTCCATAGCTGGTTTGGTGTTATTTTCATTCCTCATTGGAAATATGCAGACATATTTGCAGTCAACACAGACAAGATTAGAGGAGATGAGAGTAAAAAGGAGGGATGCAGAACAGTGGATGTCTCATCGATTGCTTCCTGACGACCTTAGAGAGCGAATCAGGCGGTATGATCAGTACAAATGGCAAGAAACCAGAGGTGTAAACGAAGACAATTTAGTTCGTGATCTTCCCAAAGATTTAAGAAGGGACATTAAGCGTCATCTTTGCTTGGATTTGTTGATGAGGGTGCCAATGTTTGAGAAAATGGACGAACAACTTTTGGACGCAATGTGTGACCGTTTGAAACCAGTGCTTTACACAGAACAAAGCTATGTTGTCCGAGAAGGAGACCCTGTCGATGAGATGCTTTTCATAATGCGAGGCAAGCTATTGACCATAACAACTAACGGTGGAAGAACCGGTTTCTTCAATTCCGAGTACTTAAAAGCTGGCGACTTCTGTGGAGAGGAGCTTCTCACATGGGCCTTAGATCCTCGTACCTCATCCAACCTTCCTATATCCACTAGGACGGTCCGAACCATCGTAGAAGTTGAAGCCTTTGCGCTAAAAGCCGATGATCTGAAGTTTGTGGCGTCTCAATTCCGGCGCCTTCATAGCAAGCAGCTTCGCCACACTTTCAGATTCTACTCGCAACAATGGCGCACATGGGCTGCGTGTTTTATACAAGCTGCATGGAGGCGCTACAGCAAGAAGAAGCTTGAAGAGTCTCTTGTTGAAGAGGAGAACAGGCTGCAAGATGCATTGGCAAAGACCGGTGGTAACACAACAAGTTTAGGTGCCACCATATATGCTTCAAGGTTTGCTGCCAATGCACTGAGATTATTGCGACGAAGTGGCACCGCAAGGAAGACAAGGGCGCTAGAGAGGATACTGCTTCAGAAGCCTGAAGAACCTAACTTTACTGATGATGAACAATAG 2142 0.4136 MGTFQQEKFVRFRDSNSEVSKRNYPAFKTTQSGRFRSTISSFSEKFQRGLESGSERIKRFRTTFDHYHYDNALSRNFGSKRKILDPQGTFLQKWNKIFVLLCVIAVSLDPLFFYVPVIDGENKCLSLDRGMEIAATFLRTFSDVFYIIHMIFQFRTGFIAPSSRVFGRGVLVEDSWIIAKRYLSSYFLVDVLAVLPLPQVVILVIIPKMSGFKSLNTKNLLKVVVIFQYVPRLLRIIPLYKEVTRTSGILTETAWAGAAFNLLLYMLASHVLGAFWYLFSIERETTCWKEACRNNDLCNKADMYCNPRGGFKYISKFLNDSCPIQEEDKKLFDFGIFLDALQSGIVESRDFPQKLFYCFWWGLKNLSSLGQNLATSTDFWEICFAVFISIAGLVLFSFLIGNMQTYLQSTQTRLEEMRVKRRDAEQWMSHRLLPDDLRERIRRYDQYKWQETRGVNEDNLVRDLPKDLRRDIKRHLCLDLLMRVPMFEKMDEQLLDAMCDRLKPVLYTEQSYVVREGDPVDEMLFIMRGKLLTITTNGGRTGFFNSEYLKAGDFCGEELLTWALDPRTSSNLPISTRTVRTIVEVEAFALKADDLKFVASQFRRLHSKQLRHTFRFYSQQWRTWAACFIQAAWRRYSKKKLEESLVEEENRLQDALAKTGGNTTSLGATIYASRFAANALRLLRRSGTARKTRALERILLQKPEEPNFTDDEQ* 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5150 713 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL-LIKE PROTEIN 7 711 - -
Mal1g5150 713 Pfam Ion transport protein 94 413 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Mal1g5150 713 Coils Coil 638 658 - -
Mal1g5150 713 CDD CAP_ED 486 617 IPR000595 -
Mal1g5150 713 Pfam Cyclic nucleotide-binding domain 506 597 IPR000595 -
Mal1g5150 713 Gene3D - 89 410 - -
Mal1g5150 713 ProSiteProfiles cAMP/cGMP binding motif profile. 486 570 IPR000595 -
Mal1g5150 713 SUPERFAMILY Voltage-gated potassium channels 85 408 - -
Mal1g5150 713 SMART cnmp_10 486 617 IPR000595 -
Mal1g5150 713 SUPERFAMILY cAMP-binding domain-like 415 608 IPR018490 -
Mal1g5150 713 Gene3D Jelly Rolls 484 604 IPR014710 -
Mal1g5150 713 Gene3D Helix hairpin bin 412 477 - -
Mal1g5150 713 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 7 711 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5150 Mal-Chr1 123775516 123780737 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5150 3 712 Ion Channels AT5G53130 76.217 0.0 1106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5150 K05391 - gmx:100801032 1166.37