Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5136 ATGGAACATAGTATCCAATGTAAACACACTATCCATGAAAGTGTTACTAAGATGAAGTACACAAAACCAAAGAAACAGAACAACAAAAACAAAAATTCTATTCAAATACCAAGAGTTATTCGTGTAACAGTTACTGATCCAGATGCTACTGATTCATCAAGCGATGAAGAATCATCAAATTTTCTTATTCCTCGTCGAAGAATAAAGCGTTATGTCAACCAAATTGAAATAGAAACCGTCGCCTCAACGACGGTTTCTGGTAATAAAAGAAGGTCTGGTAATAAGAGAAAAATGAAACCTTCGCAGATACCTGCGAAGGTTCCATCTATCACCGGATACGAAAGAAAGTATCGCGGTGTACGGATGAGACCGTGGGGAAAATGGGCTGCTGAGATTCGTGATCCTGGAAGTCGAGTCCGGTTATGGTTGGGAACTTTCAGCACTGCTGAAGAAGCTGCTATGGTTTATGACGCCGCCGCGATTAAGTTTCGTGGTAAAGACGCCATTTTAAACTTCTCAGCATCACCGCCGGAGAATGTAGAAAAAGATGAAGTTGTTAAAGGAAAAATGAAGGTTTCCGCCGTTAAAACGGAGGTTTCCGGTTCCGGTGAAGATTCCGGTGATGAGTTTATTAATCTATCTTCTCCTACTTCTGTACTCCGATTCAGAAATGAGGAGATTGGTGAACCGGTGAAATTGGTTGAACCGGTTAATGAAGGTGAACCGGTTGAACCGTTTGGTGAAACTGAATGTGAAGGTGAAACGAGGTTTTTTGATGAAACTAATGATATTTTCCGACAAGACATGGATGATGTGTTTAATTTTCCAACTACATGTGATTATTCACTTATGTTTGATGAAGATCCTATTCAATTTTTTGATGAAACGACACCGGTTTTAATTGATGAGTGTCGTTTTAGTGATCACGTGGTATTTGATAAAACGCACTTACCATCATCATCATCAACAACTCTATGCCAAGAACAAGGAGATGATTTTCTTGATGACATTTTGTTAGATTTAGAACCTCTTGTTATGCTTTGA 1044 0.3908 MEHSIQCKHTIHESVTKMKYTKPKKQNNKNKNSIQIPRVIRVTVTDPDATDSSSDEESSNFLIPRRRIKRYVNQIEIETVASTTVSGNKRRSGNKRKMKPSQIPAKVPSITGYERKYRGVRMRPWGKWAAEIRDPGSRVRLWLGTFSTAEEAAMVYDAAAIKFRGKDAILNFSASPPENVEKDEVVKGKMKVSAVKTEVSGSGEDSGDEFINLSSPTSVLRFRNEEIGEPVKLVEPVNEGEPVEPFGETECEGETRFFDETNDIFRQDMDDVFNFPTTCDYSLMFDEDPIQFFDETTPVLIDECRFSDHVVFDKTHLPSSSSTTLCQEQGDDFLDDILLDLEPLVML* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5136 347 Gene3D AP2/ERF domain 115 174 IPR036955 GO:0003700|GO:0006355
Mal1g5136 347 CDD AP2 116 175 IPR001471 GO:0003700|GO:0006355
Mal1g5136 347 SUPERFAMILY DNA-binding domain 116 174 IPR016177 GO:0003677
Mal1g5136 347 MobiDBLite consensus disorder prediction 83 103 - -
Mal1g5136 347 MobiDBLite consensus disorder prediction 1 20 - -
Mal1g5136 347 ProSiteProfiles AP2/ERF domain profile. 116 173 IPR001471 GO:0003700|GO:0006355
Mal1g5136 347 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF4-LIKE 6 245 - -
Mal1g5136 347 SMART rav1_2 116 179 IPR001471 GO:0003700|GO:0006355
Mal1g5136 347 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 6 245 - -
Mal1g5136 347 MobiDBLite consensus disorder prediction 1 60 - -
Mal1g5136 347 Pfam AP2 domain 116 165 IPR001471 GO:0003700|GO:0006355
Mal1g5136 347 PRINTS Ethylene responsive element binding protein signature 117 128 IPR001471 GO:0003700|GO:0006355
Mal1g5136 347 PRINTS Ethylene responsive element binding protein signature 139 155 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5136 Mal-Chr1 123375659 123376702 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5136 7 339 AP2-EREBP Transcription Factor Family AT4G27950 42.319 3.27e-57 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Mal1g5136 AP2 5.6e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5136 - - lang:109327510 231.491