Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5120 ATGGATCATGGAAGTCCCTCATCTAACAACAACCGTTCCACACAATCAAGCTCTGTCCCTTTACCTCTAACAAGGGAAGAAGAGCTGCGTCTTCCCATCCGAAATTTGACAAGAATCATGCAACATGCTCTTCCATTGCGCGCGAGAATAACTTATGATGCTAAGGAATCCATACAAATGTGTGTGTCTGAATTCATGGGCATCGTCACGAGTGAAGCTAATGGGAGGTGCATAGCTGAAAATCGAAAGATTGTTAGCGGTGAAGATATAATATGGGCCATGAATAGGTTGGGCTTTGAGGACTATGTTGGGCCTCTATCTATTTTACTCCAAAAATATCGAACCCATGAGGCTCAATTAAGAGGTATGTCAACTGCTTCTGGGATCAACATGGATGGGTCGGGTGCTAGTGGCTCCAGCAGTGGTAATGGACAACATTGA 441 0.4444 MDHGSPSSNNNRSTQSSSVPLPLTREEELRLPIRNLTRIMQHALPLRARITYDAKESIQMCVSEFMGIVTSEANGRCIAENRKIVSGEDIIWAMNRLGFEDYVGPLSILLQKYRTHEAQLRGMSTASGINMDGSGASGSSSGNGQH* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5120 146 MobiDBLite consensus disorder prediction 1 24 - -
Mal1g5120 146 SUPERFAMILY Histone-fold 27 125 IPR009072 GO:0046982
Mal1g5120 146 MobiDBLite consensus disorder prediction 126 146 - -
Mal1g5120 146 MobiDBLite consensus disorder prediction 1 22 - -
Mal1g5120 146 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-6 7 125 - -
Mal1g5120 146 PRINTS CCAAT-binding transcription factor subunit A signature 58 76 - -
Mal1g5120 146 PRINTS CCAAT-binding transcription factor subunit A signature 77 95 - -
Mal1g5120 146 PRINTS CCAAT-binding transcription factor subunit A signature 96 114 - -
Mal1g5120 146 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 30 94 IPR003958 -
Mal1g5120 146 Gene3D Histone, subunit A 22 138 IPR009072 GO:0046982
Mal1g5120 146 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 7 125 IPR027113 GO:0001228|GO:0006355|GO:0016602
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5120 Mal-Chr1 123101807 123103726 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5120 24 119 CCAAT-HAP3 Transcription Factor Family AT4G14540 54.167 5.52e-37 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Mal1g5120 CBFD_NFYB_HMF 1.1e-16 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5120 K08065 - mnt:21401200 119.012