Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5104 ATGGTGCCACCGGGGCCTCCGACTCCGATTGGTGGTGCCCAGTCTGTTTCGCCATCGCTTATGAGATCAAATTCGGGGATGATGGGAGGTCAAGGAGGACAAGCTTCGTTTCCATCGTTGGTTTCACAGCGAAATCAGTTTAATAACATGAACAACATGAATATGTTGGGAAATATGTCTAATGTTGCTTCCATGATGAATCAGTCTTTTTCGAATGGGATTCCGAACTCGGGGATGTCTGGAATGGGAGGTGGTCAGCGGGGTGGTATGGATGCTGGGGCGGAGCAAGACCCGTTGTCTGGTGTTGGTAATGGAATGGGATTTGGTAATCCTTCGTCGTCGTTTGGGCAATCGAATGTTGCTAACCCTGGTTCATCTGGTCAAGGTCAAGGTCAGGGTCAGCAATTTTCGAACCCGTCTGGTAATCAGATGTTGTCGGATCAGCAGCATTCGCAACAACTTGACGTTCAGAATTTCCAACATGGTCAGCAGCAGTCAGCACAGCAGTTTTCAGCTCCGATGAACACTCAACAACAGCACCAACAACATCAGCAGCATTTTCAATCAATGCGAGGAGGGATAGGTGGTATTGGACCTGTGAAGATGGAGCCGCAGGGAAACAACGATCAGTTTGGGCAGCAGCAATTGTCATCGCTGAGGAATCTTGGTCAGGTGAAGTTGGAACCGCAACAACTTCAATCAATGAGAGGAGGTATGTCGGCTGTAAAAATGGAGCCCCAGCATAGTGATCAGCCATTTTTGCATCAACAGCAACAGCAGCAACAGCAACAACAGCTGCTCCATATGTCGAGGCAAACCTCTCAGGCTACTGCTGCGCAGATGAATCTTTTGCAACAACAAAGACTTTTGCAATTCCAACAGCAGCAGCAACTCTTAAAATCAATGCCTCCGCAGCAACGGTCCCAGCTACCGCAGCAGTTTCAACAGCAAAATATGCCCGTAAGGTCTCCTGCGAAACCAGCATATGAACCTGGAATGTGTGCTAGGCGGCTGACACATTACATGTATCAGCAACAACATAGACCTGAAGATAACAACATTGAATTCTGGAGGAAATTTGTTGCCGAGTATTTTGCTCCGAATGCCAAAAAGAAGTGGTGTGTTTCCATGTATGGAAGTGGAAGACAAACAACTGGAGTTTTCCCTCAGGACATTTGGCACTGCGAAATATGTAATCGCAAACCTGGCCGTGGGTTTGAGGCAACTGCCGAGGTTCTTCCAAGGCTTTTCAAAATAAAGTATGAAAGCGGTACTTTAGAAGAGCTACTGTATGTTGACATGCCTCGTGAATATCATAATTCCTCTGGCCAAATTGTTCTAGATTATGCAAAAGCAATACAAGAAAGTGTTTTTGAGCAACTTCGCGTTGTTCGGGATGGTCAACTTCGAATAGTTTTCTCTCCAGATCTGAAGATATGCTCTTGGGAATTTTGTGCTCGGCGTCATGAAGAGCTCATCCCCAGAAGATTGTTAATTCCTCAGGTTAGTCAGCTTGGAGCAGTTGCTCAAAAATATCAGGCATGTACTCAAAATGCAGCCGCCAATCAATCCGTTTCAGAGTTACAAAATAATTGCAATATGTTTGTTGCATCAGCCCGTCAGCTGGCAAAAGCCTTAGAAGTTCCTTTGGTTAATGATTTAGGATATACAAAGAGATATGTGCGGTGTCTACAAATATCAGAAGTGGTAAATAGTATGAAAGACTTGATAGATTATAGCAGAGAAACAGGGACTGGACCAATGGACAGCTTAGCCAAATTCCCTCGGAGAACAGGCAATTCATCTGCAGTTCATAATCAGGCGCAACAGTCTGAAGATCAATTACAGCAGCAACAACAGCATATGGTGGCCCATAACTCAAATGGTGATCAAAACTCTGTGCAAGCTGCTGCCATGCAAATTCCATCTAACAATGGTGTGGCAAGTGTAAATAACAATGTCAATCCAGGATCTGCATCGACCACCACAAGCACCATTGTTGGACTTCTGCACCAGAACTCTATGAATGCTAGACAGCAAAATTCAATGAACAATGCAAGCAGTCCATATGGAGGTAGTTCTGCCCATATTCCATCCCCTGGTTCTTGCAGTACAGTGCCACAAGCGCAACCAAACTCATCCCCTTTTCATTCACCGACACCATCCTCATCTAACAACAACCAACAAACCTCTCACCCTGGCTTACCATCTGCAAATCACATGGGTACATCAAACTCACCAGCTAATATTTCCATGCAACAACAGCCGACATCTATTTCTGGTGAAGCCGATCCTAGTAATGATGCTCAGAACTCGGTCCAGAAAATCATTCACGATATGATGATGTCCTCCCAGATGAACGGAACAGGTGGAATGGTGGGTGCTAATTCTCTTGGAAATGACATGAAGAATGTAAATGGTATCCTACCGGTGAGTACTAATTCAGGCCTCAACGGTGGCAATGGCATGATGGCTAATGGAGGTGTGAACAGTAATTCTGGTGTTGGGGTTGGTGGTTACAGCACAATGGGTCTTGGTCCATCCGGTTTACCCAATGGAATGAGGCCTGGAATGGGAAATAATTCAGTCATGAATGGAAGGGGAGGAATGGCATTGATTGCTCGGGAACAAGCTATGAATCATCAACAGGATTTGTCAAGCCAACTACTTAGTGGTTTAGGAGCAGTAAATGGTTTTAATAATCTTCAATTTGATTAG 2718 0.4511 MVPPGPPTPIGGAQSVSPSLMRSNSGMMGGQGGQASFPSLVSQRNQFNNMNNMNMLGNMSNVASMMNQSFSNGIPNSGMSGMGGGQRGGMDAGAEQDPLSGVGNGMGFGNPSSSFGQSNVANPGSSGQGQGQGQQFSNPSGNQMLSDQQHSQQLDVQNFQHGQQQSAQQFSAPMNTQQQHQQHQQHFQSMRGGIGGIGPVKMEPQGNNDQFGQQQLSSLRNLGQVKLEPQQLQSMRGGMSAVKMEPQHSDQPFLHQQQQQQQQQQLLHMSRQTSQATAAQMNLLQQQRLLQFQQQQQLLKSMPPQQRSQLPQQFQQQNMPVRSPAKPAYEPGMCARRLTHYMYQQQHRPEDNNIEFWRKFVAEYFAPNAKKKWCVSMYGSGRQTTGVFPQDIWHCEICNRKPGRGFEATAEVLPRLFKIKYESGTLEELLYVDMPREYHNSSGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGAVAQKYQACTQNAAANQSVSELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRETGTGPMDSLAKFPRRTGNSSAVHNQAQQSEDQLQQQQQHMVAHNSNGDQNSVQAAAMQIPSNNGVASVNNNVNPGSASTTTSTIVGLLHQNSMNARQQNSMNNASSPYGGSSAHIPSPGSCSTVPQAQPNSSPFHSPTPSSSNNNQQTSHPGLPSANHMGTSNSPANISMQQQPTSISGEADPSNDAQNSVQKIIHDMMMSSQMNGTGGMVGANSLGNDMKNVNGILPVSTNSGLNGGNGMMANGGVNSNSGVGVGGYSTMGLGPSGLPNGMRPGMGNNSVMNGRGGMALIAREQAMNHQQDLSSQLLSGLGAVNGFNNLQFD* 906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5104 905 Coils Coil 608 628 - -
Mal1g5104 905 MobiDBLite consensus disorder prediction 12 38 - -
Mal1g5104 905 Pfam LIM-domain binding protein 337 591 IPR029005 -
Mal1g5104 905 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 1 905 - -
Mal1g5104 905 MobiDBLite consensus disorder prediction 680 769 - -
Mal1g5104 905 MobiDBLite consensus disorder prediction 106 189 - -
Mal1g5104 905 MobiDBLite consensus disorder prediction 581 631 - -
Mal1g5104 905 MobiDBLite consensus disorder prediction 1 38 - -
Mal1g5104 905 MobiDBLite consensus disorder prediction 67 212 - -
Mal1g5104 905 MobiDBLite consensus disorder prediction 595 631 - -
Mal1g5104 905 PANTHER LIM DOMAIN-BINDING PROTEIN 1 905 IPR029005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5104 Mal-Chr1 122683503 122692315 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5104 1 809 C2H2 Transcription Factor Family AT1G43850 60.210 0.0 748