Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5103 ATGGGTTCCTCGGGGAATAAATACAAAACCCTATCTACCGTCGATGAAGAAGAAAATGGTTCTACAAATAACAATTTCTACGATGTCTATGGTCCCCAAGCCAAGGCAGATGTTGTTTTCAAGTCACCAGAAGAAGATAATTCAACTCTGAATCTTGCTGACGTTCAAGGACTTGTAACTTGGGTGCTTGGTGAAGGATTCATGCCATCATGGGTTTTTATCAAGAATAAACCTCTTATTCTCAAAGTAGTTATGCTCTATATGCCAGGCCTGGATGCAGCTTTGTACTTGTCACTGTCCAAAGTGCTTCCTAATTTAAAAAAAGCATGTGGCAAACCAAGACCAGTCCATGCTCTCAGTTGTGTATCAGATAGTATGCAGACAATAGACGCACTCCTAACATGCAAGCAGAAAAGAAAAAGGGATGAAAACGATTCAATTACGAAGAAATCTACTTTGACATCTCAACAAGAAGAAGTCCGTGGTGGTACTGGTAGTCTATCATTTACGGAGCTTACTAAAGACATACCTTTCCCTGTTACATACTATACACTAACAGAGAGAGATCTGGAGGAGAATGAGTATCCTGTTAATAAGCCAGGTTTTGTTTCTACTCTTCCTGCTCCTCCGGGGTCTCCCTATAATGAGATGTTAGCAGTTGACTGTGAGATGTGCATAACAGGTGAGGGGTTTGAGCTAACAAGAGTTACTCTGGTGGATGTCAAAGGACAGATTTTGTTAGATGAATTGGTTAAACCTTCAAATCATATCACTGATTACAATACAAGATTTAGTGGAATAACGGCCGAGATGTTAAATGGGGTAACGACAAGTCTGACAGACATTCAGGAAAAATTTCAAAAACTGGTTTACAAAGAAACTATTCTTGTTGGGCATTCTTTGGAAAATGATTTATTAGCATTGAAGATATCACACGACCTGGTCATTGACACAGCAGTATTATACAAACACCCCCGAGGGTCTTCCCATAAAAGTGCTTTGCGGTTTCTTACTAAAAGATTTCTTTCTAGGGAGATACAACAATCGGGGGATGGACATGACAGCGTTGAAGATGCTAGGGCTACCATGGAATTGGCACTATTGAAGATCAGAAATGGGCCTGGATTTGGCGCCCCTCCATCGTTTACGCGAAAAAAACTCCTTTCCATTTTGGGCGAGTCTGGCAAAACTTCTTCAATGATTGATGACATATCAATAGTAAAACGATTTGCCTCCGAGTCCTCTAATGCAATTCCTGTGACATCTGATGAAGCAGCACTTACAAAAACCATCACGGAGTTGAAGAATGAAAAGGTGCATTTTATTTGGACTCAATTTTCAGAGTTACACTCATACCTGAAGAAACAAGCTGAGGATTCAGAAAGCTTTAATAAAAAACTTGCAGAGATGATTGCATTAAATACATGTCAGAAGAATCAATCAAAAGGAAAAGGCCCCAAATCGAATATATCTGCTGAACTGAAGGAAATTGTTGGTCGCATGGATGTTAGAATTCATAAACTGTATAAATCATTACCAACTAATGCTATGATGATAGTTTGCACTGGTCATGGAGACACGGCAGTTGTTCGCAGGTTGAGGAAAATGCTTACGGAGGAGGGTGAAAGTAATTTTGGTCGTGAGAAGATTCTGGAAAGCTTAAAAGAGTTTCAGGCTAGAGCCGAAGTAGCCTTGTGTTTTGTAGGTGTAAAACACTGA 1719 0.3997 MGSSGNKYKTLSTVDEEENGSTNNNFYDVYGPQAKADVVFKSPEEDNSTLNLADVQGLVTWVLGEGFMPSWVFIKNKPLILKVVMLYMPGLDAALYLSLSKVLPNLKKACGKPRPVHALSCVSDSMQTIDALLTCKQKRKRDENDSITKKSTLTSQQEEVRGGTGSLSFTELTKDIPFPVTYYTLTERDLEENEYPVNKPGFVSTLPAPPGSPYNEMLAVDCEMCITGEGFELTRVTLVDVKGQILLDELVKPSNHITDYNTRFSGITAEMLNGVTTSLTDIQEKFQKLVYKETILVGHSLENDLLALKISHDLVIDTAVLYKHPRGSSHKSALRFLTKRFLSREIQQSGDGHDSVEDARATMELALLKIRNGPGFGAPPSFTRKKLLSILGESGKTSSMIDDISIVKRFASESSNAIPVTSDEAALTKTITELKNEKVHFIWTQFSELHSYLKKQAEDSESFNKKLAEMIALNTCQKNQSKGKGPKSNISAELKEIVGRMDVRIHKLYKSLPTNAMMIVCTGHGDTAVVRRLRKMLTEEGESNFGREKILESLKEFQARAEVALCFVGVKH* 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5103 572 Pfam Exonuclease 219 365 IPR013520 -
Mal1g5103 572 SUPERFAMILY Ribonuclease H-like 217 369 IPR012337 -
Mal1g5103 572 SMART exoiiiendus 216 375 IPR013520 -
Mal1g5103 572 MobiDBLite consensus disorder prediction 144 165 - -
Mal1g5103 572 Gene3D - 214 373 IPR036397 GO:0003676
Mal1g5103 572 MobiDBLite consensus disorder prediction 1 22 - -
Mal1g5103 572 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 19 556 - -
Mal1g5103 572 PANTHER LD29573P 19 556 - -
Mal1g5103 572 MobiDBLite consensus disorder prediction 149 165 - -
Mal1g5103 572 CDD REX1_like 218 367 IPR034922 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5103 Mal-Chr1 122670857 122679837 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5103 218 365 C2H2 Transcription Factor Family AT2G48100 30.247 3.18e-07 50.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g5103 1 122670857 122679837 Mal1g5103 1 122670857 122679837 ECH