Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5098 ATGGTGAAGGAAACAGAGTATTATGATCTCCTTGGAGTTTCTCCTTCTGCTTCCGATGATCAAATTCGCAAAGCTTATTATCACAAGGCAAAACAAGTTCATCCTGATAGAAACCAAAACGATCCCAATGCTGCACACAAATTCCAGATTTTGGGCGAAGCATATCAGGTTTTGAGTGATCCAGTACAAAGGAATGGTTATGATCAAAATGGGAAGCATTCTGTTTCTAGAGAAACTATGCTTGATCCAATGGCTGTTTTTGCCTTGCTCTTTGGAAGTGAACTGTTTGAGGACTACGTTGGGCATCTAGCTGTTGCATCGATGGCTTCTTCTGAACTAGCTGATGAAAGTGAGGATTTGCAGGAGAAGTTAAAGGCAATCCAAAAAGAAAGGGAAGAAAAGCTAGCAAGATTTTTGAAAGATTTTCTCAGTCAATATGCTCGTGGTGACCAAAAGGGTTTCTACCAGCGCGCAGAATCTGAAGCAAGACGGCTTTCTAATGCAGCCTTTGGAGTTGACATGTTACATACCATCGGCTATATATACTCAAGACAAGCAGCACAAGAACTAGGGAAAAAGGCCCTTTTTCTTGGAGTTCCATTTCTGGCTGAATGGGTTCGCAATAAGGGACATTTTTGGAAATCACAGTTAACAGCTGCTAAAGGTGCTTATCAGTTGCTCCAACTTCAAGAAGAACTCAGCAAGCAATTTAAAACAAGTGGCAGTTGCCATGAAAATGTTGACTCCCATATTCGTCTTAATAAAGACACTTTGTTGAATTCCTTGTGGAAGTTGAACGTAGTGGACATCGAAGTAACCCTTGCACACGTGTGTCAAATGGTGCTAAAGGAAAATAACGTTAGGAGAGAGGAACTTAAAGTTCGAGCCGCCGCTCTTAAAATTCTTGGGAAGATATTTCAGGAAAAGAATGCAAAAGGAGAAACATTGAAGAAGAAACTCGCTGTTGATTCTGATGACGAAGGAAGCAGCTCTGATTCATCAGACGATGAATCACACAGAGCATTAACCTATCGAACTCCCTTTTTCAATCAGGGTATCGGCAGGCTCTTCAAATGCCTTTGTAATCCTGCATTTGATGTGGATGATGAAGAGGAGATAGTTTACAAAAGCAAATGA 1137 0.4099 MVKETEYYDLLGVSPSASDDQIRKAYYHKAKQVHPDRNQNDPNAAHKFQILGEAYQVLSDPVQRNGYDQNGKHSVSRETMLDPMAVFALLFGSELFEDYVGHLAVASMASSELADESEDLQEKLKAIQKEREEKLARFLKDFLSQYARGDQKGFYQRAESEARRLSNAAFGVDMLHTIGYIYSRQAAQELGKKALFLGVPFLAEWVRNKGHFWKSQLTAAKGAYQLLQLQEELSKQFKTSGSCHENVDSHIRLNKDTLLNSLWKLNVVDIEVTLAHVCQMVLKENNVRREELKVRAAALKILGKIFQEKNAKGETLKKKLAVDSDDEGSSSDSSDDESHRALTYRTPFFNQGIGRLFKCLCNPAFDVDDEEEIVYKSK* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5098 378 ProSitePatterns Nt-dnaJ domain signature. 48 67 IPR018253 -
Mal1g5098 378 CDD DnaJ 6 60 IPR001623 -
Mal1g5098 378 Pfam X-domain of DnaJ-containing 128 312 IPR026894 -
Mal1g5098 378 SMART dnaj_3 5 63 IPR001623 -
Mal1g5098 378 PRINTS DnaJ domain signature 8 26 IPR001623 -
Mal1g5098 378 PRINTS DnaJ domain signature 63 82 IPR001623 -
Mal1g5098 378 PRINTS DnaJ domain signature 43 63 IPR001623 -
Mal1g5098 378 PRINTS DnaJ domain signature 26 41 IPR001623 -
Mal1g5098 378 ProSiteProfiles dnaJ domain profile. 6 71 IPR001623 -
Mal1g5098 378 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 1 361 - -
Mal1g5098 378 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 1 361 - -
Mal1g5098 378 Coils Coil 110 137 - -
Mal1g5098 378 Gene3D DnaJ domain 1 85 IPR036869 -
Mal1g5098 378 SUPERFAMILY Chaperone J-domain 2 101 IPR036869 -
Mal1g5098 378 Pfam DnaJ domain 6 68 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5098 Mal-Chr1 122603644 122613512 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5098 7 68 C2H2 Transcription Factor Family AT1G74250 41.791 6.26e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5098 - - gmx:100793811 624.78