Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5092 ATGTTTTCAAAAAACTCAATCACTGTGTTTGTGTCTGTGTCTTCAACACAAATCCAAAAAATGGATAACCAATCCAAGTTCCTTTTCCTTCTCTTCACCCTTTTCATAGCCACTCCTTCTTCTTATGCAGCATCATGTCCTATGGATCTCAGCTATGTTGAAACCTTTCCATGGGACTCATCAACATGCAGAAACACAATTGACACACAACACTGTTGTCAATCTCTTCTTAGTCTCTTTGGTATAGGACTTGCAAAACATCTCAAAGAAACTTCAATCTTTCAACTCCCAGATGAAAACACTTCCACAACATGTTTACAAGATTTCAAACTCAAACTTTCTTCCTTAAGAATCCAACCTTCATTAGTCCCTTCTTGTTTCCATAACTCAACACAATTTGTCACAAACACATCAAGTTGTGCAGGTATAACAAACATCACAGATTGGAAACAAAAAGTTGGTATGATTAGTCCTTTAGATACTTCTTGTAATGGTGATTTGAGTTCTGAAACTAGTTGTAGTATTTGTACTGATGCTGGTTTCAAAGTCACTACTCAACTTAGTACTATTGATCCAAAAAATTCTTCCAAGTGTTTTTACTTTTCAATTTTATATGCTATTGGTGTTGTGAATCAATTTGGTCCTACACATCCTGATACTGCTGGTTGTATACTTGGTATGCCACTTTCAACAAAAGGGTCATCAAATAATGGAAAAATTTTGAAACTTGTTTTTGGATTATTAGGTGCTCTTGTTGGTGTTATTCTTGCTTTTGTGCTTATAATTATGTACAAAAAATGGGATAAGATGAGAAGGGAAAATATTTATCATAGGTCAATTGAAAACAGTGTTAGAGATAGTGTTTTGCCTAATACAGGAGCTAAATGGTTTCACATATCAGAACTTGATAAGGCTACAAACAAATTTTCACAGAAGAATATGATTGGTCAAGGTGGTGATGGTGTTGTGTACAAAGGAACACTTTCAGATGGAACTTTGGTTGCAGTGAAAGAAATTTTTGATTTGGATACTAGAGGTGATGAAGAGTTTTGTTATGAAGTTGAGATTATAAGCAAAATTAAGCATAGGAATCTTCTTGCTTTAAGAGGATGTTGTGTTACAAGTCATAGTGTAAAAGGTAAGAGAAGATTTTTGGTTTATGATTATATGCCTAATGGAAGTTTAAGTTATCAATTATCTGTTAATGGTGCTAATAAGCTTACTTGGCCACAAAGAAAGAATATTATACTTGATGTGGCTAAAGGGCTAGCTTATTTGCATTATGAAATCAAACCGCCGATTTTTCACCGCGATATTAAGGCGACGAACATACTTTTAGACTCGAAAATGAAAGCGAAAGTTGCGGATTTCGGATTAGCAAAACAAGGTAATGAAGGACAATCTCATCTCACAACAAGAGTAGCTGGTACATATGGTTATTTAGCACCTGAGTATGCTTTATATGGACAATTAACAGAGAAAAGTGATGTTTATAGTTTTGGCATTGTGATACTTGAGATAATGAGTGGTAGAAAAGTGCTTGATACAATAAATTCACCAGTTGTTTTGATCACTGATTGGGCTTGGACACTTGCAAAATCAGGAAAAGTTGATGAAATATTTGATCAAGCAATAAAAGATGAAGGGCCAGAGAAAATCATGGAAAGATTTGTACTTGTTGGAATTCTTTGTGCTCATGCAATGGTTGCATTAAGACCTACTATTGCTGAGGCAATTAAGATGTTAGAAGGTGATATTGATATTCCTAATTTGCCTGATAGACCTGTTCCACTTGGTCATGAATCTTTTCAATCTTCTCTTTTGAATGGTATTCAAAGAAGTGGAAGATCAACACCTTATTATAATTCTTCTTTTTCTACTAGTATGATTAGCACAATTAGTTTAAAATGA 1911 0.3428 MFSKNSITVFVSVSSTQIQKMDNQSKFLFLLFTLFIATPSSYAASCPMDLSYVETFPWDSSTCRNTIDTQHCCQSLLSLFGIGLAKHLKETSIFQLPDENTSTTCLQDFKLKLSSLRIQPSLVPSCFHNSTQFVTNTSSCAGITNITDWKQKVGMISPLDTSCNGDLSSETSCSICTDAGFKVTTQLSTIDPKNSSKCFYFSILYAIGVVNQFGPTHPDTAGCILGMPLSTKGSSNNGKILKLVFGLLGALVGVILAFVLIIMYKKWDKMRRENIYHRSIENSVRDSVLPNTGAKWFHISELDKATNKFSQKNMIGQGGDGVVYKGTLSDGTLVAVKEIFDLDTRGDEEFCYEVEIISKIKHRNLLALRGCCVTSHSVKGKRRFLVYDYMPNGSLSYQLSVNGANKLTWPQRKNIILDVAKGLAYLHYEIKPPIFHRDIKATNILLDSKMKAKVADFGLAKQGNEGQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILEIMSGRKVLDTINSPVVLITDWAWTLAKSGKVDEIFDQAIKDEGPEKIMERFVLVGILCAHAMVALRPTIAEAIKMLEGDIDIPNLPDRPVPLGHESFQSSLLNGIQRSGRSTPYYNSSFSTSMISTISLK* 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5092 636 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 28 610 - -
Mal1g5092 636 Gene3D Transferase(Phosphotransferase) domain 1 390 588 - -
Mal1g5092 636 PANTHER OS01G0253100 PROTEIN 28 610 IPR045271 GO:0004714|GO:0006468
Mal1g5092 636 SUPERFAMILY Protein kinase-like (PK-like) 294 600 IPR011009 -
Mal1g5092 636 Pfam SPARK 43 199 IPR043891 -
Mal1g5092 636 Pfam Protein kinase domain 310 521 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g5092 636 Gene3D Phosphorylase Kinase; domain 1 270 389 - -
Mal1g5092 636 ProSiteProfiles Protein kinase domain profile. 309 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g5092 636 SMART serkin_6 309 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g5092 636 ProSitePatterns Serine/Threonine protein kinases active-site signature. 434 446 IPR008271 GO:0004672|GO:0006468
Mal1g5092 636 CDD STKc_IRAK 315 584 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5092 Mal-Chr1 122526942 122528852 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5092 41 612 Receptor kinase-like Gene Family AT1G11050 51.252 0.0 575
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Mal1g5092 Pkinase 1.8e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5092 - - ccaj:109788171 951.044