Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5089 ATGGCGAAGACGAAGTCGTTTCAAGGCGTAAACGTGTTCATGTCGCGAAACCTAGTTCCGCCTGAAATCTTCGCCACGCTTCACGACGCTGTTAAGGATAAAGGCGCTCAAATTCACCTCTGTTGTGACCCTTCCCGTAATGGTCCCAATGATTATCATATAATTTCGTGTAGTAAACATGAGAAATTTGAAGATCTTAAATCGAAGGGATGTAAAATGCTTGGTCCTAGATGTGTTCTTCAGTGTGCTAAAGAAGGAAGGCCTCTGCCTAAACAAGGCTTCACTTGTTGCTTTACTATGGATGGTGTCAAAATACTCGCTTCTGGCTTTGACACGGAGGAGAAGGTTAAGATAGAAGAATTAGTGACTGAAATGGGGGGAGCTCTACACGCTAAACCGACTTCAGATTTGAACTTTGTCATTGTGAAGAATGTTTTGGCTCTAAAGTACAAGTGGGCTTTGAATGTCCTGAAGAAACCAATAGTTACTTATGAATGGTTAAAGCAATGCTCAGATGAGCACCGCGTTGTTCCTCAAGAGTCATACAAGGTTCTTCCTTTCTCTGGGTTAAGGATCTGTGTGACTGGTTTCCCAGCAGCTTTGAGTTTTTCAGATAAGCGCAAAGAGATGGAAAAGATTATTTTACAGAATGGTGGAAAATACTCTGCAGAATTGACAAAGAAGTGCACACATTTGATTTCTGATATATCCTTTTGA 717 0.4142 MAKTKSFQGVNVFMSRNLVPPEIFATLHDAVKDKGAQIHLCCDPSRNGPNDYHIISCSKHEKFEDLKSKGCKMLGPRCVLQCAKEGRPLPKQGFTCCFTMDGVKILASGFDTEEKVKIEELVTEMGGALHAKPTSDLNFVIVKNVLALKYKWALNVLKKPIVTYEWLKQCSDEHRVVPQESYKVLPFSGLRICVTGFPAALSFSDKRKEMEKIILQNGGKYSAELTKKCTHLISDISF* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5089 238 Pfam twin BRCT domain 190 234 IPR001357 -
Mal1g5089 238 ProSiteProfiles BRCT domain profile. 100 184 IPR001357 -
Mal1g5089 238 SUPERFAMILY BRCT domain 59 183 IPR036420 -
Mal1g5089 238 Gene3D BRCT domain 97 184 IPR036420 -
Mal1g5089 238 SUPERFAMILY BRCT domain 186 235 IPR036420 -
Mal1g5089 238 PANTHER DNA REPLICATION REGULATOR DPB11-RELATED 7 234 - -
Mal1g5089 238 Pfam BRCA1 C Terminus (BRCT) domain 101 170 IPR001357 -
Mal1g5089 238 Gene3D BRCT domain 185 237 IPR036420 -
Mal1g5089 238 SMART BRCT_7 97 174 IPR001357 -
Mal1g5089 238 SMART BRCT_7 4 86 IPR001357 -
Mal1g5089 238 Gene3D BRCT domain 33 94 IPR036420 -
Mal1g5089 238 CDD BRCT 103 170 - -
Mal1g5089 238 ProSiteProfiles BRCT domain profile. 182 238 IPR001357 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5089 Mal-Chr1 122477419 122480465 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5089 1 237 Core DNA Replication Machinery Family AT1G77320 66.667 2.11e-108 332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5089 K10728 - gmx:100804966 417.927