Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5083 ATGATCGCCACCCATGACGGTGGTTCCGCCACCAGTGATGGCCGTACTGTGGTAGTTGGTGTGAAGTTGGACTCTCAAAGTCACAGCACTGAGTTACTTACATGGTCTTTGGTTAATGTTGCTCAACCTGGTGATCTTATTGTTGCTCTTCATGTTCTTAGAAATGATGATATTGTGAATCGAGATGGAAAATCTTCTCTGTTTTCTCTTGTTAAAGCATTTGACTCTATTCTTTCTGGTTATGAAGGATTCTGCAATCTGAAGCAGGTGGATCTGAAGCTAAAAATTTGCCGGGGATCATCAGTGAGGAGAATTTTGGTTAGAGAAGCAAATGAATATCGTGCAACTCATGTTATAGTTGGAAAACCACAAGGTCTTAGTAAAATTAGACCAACTATTTCTATACCTAGGTATTGTGCTAAGAAGCTATCAAAGGATTGTTGGGTTTTTGCTGTTGATAATGGGAAAGTTGTGTTTAAGAGAGATGGATCACCGACAAATCACGTTGACTTAAAAGGTCGCCGAATTGGGTTGCTCGGTTCGATTCAAAGGACATTCAGCAAGAGTTCAAAAGTACTAAATGATGATATGCACGAAGCGATATTGCCGGATTCATCTTGCTACCAAGCTGCAGATCAAGAGTCTTATGTCGGTGACGATGGTGATAGTGAGAAAAACCCATTGGCTATGGTACCTGTAAAGGCAACTGAAGCTGGCTCTAGAGAAGTAACTGATTTAAAACCTGGTTGGCCACTACTACATAGCAGAATTTCAACATCAGACAGGAGAATTTCTGAAAGATCATTGTTTCGTCGGATTTCAGTGGTCCAATGGGCAATGCAGTTGCCCTCTAGAACTCTTTCCTTTGATAAAGATCAATTTTTGGGTCTAGATAGCAAAAGTGGTGCTCTTGTTCCGGTGAATGCCGAAATAGGAACTATTACTTCACCTGAACGCAAATCGATAAGCGTTCCTAAAGAATTAGAGGGCCTTCATGAGAAATACTCATCTACTTGTAGATTGTTTAACTACCAAGAACTTGTATCAGCAACCTCAAACTTCTTGCCTGAAAATTTGATCGGTAAAGGAGGAAGTAGTCAGGTTTATAAAGGATGCCTTCCTGATGGAAAGGAACTTGCTGTTAAGATCTTAAAGCCGTCTGATGATGTTTTGAAGGAGTTTGTTTTAGAGATAGAAATTATCACTGCTTTGCATCACAAAAACATCATTTCTCTCATTGGATTCTGCTTTGAGGATGGCAATCTTCTTTTGGTCTATGATTTCTTATCAAGAGGGAGCCTTGAACAAAACCTTCAGGGTAATAAGAAAAATCCACTTGAGTTTGGTTGGACTGAGAGATATAAGGTGGCAATGGGCGTTGCCGAAGCTTTGGAGTATCTGCATAATAGCAGTGACCAATCTGTGATCCATCGCGATGTAAAATCATCAAATGTGTTATTATCCGAGGATTTTGAACCTCAGCTTTCTGACTTTGGACTTGCGAAATGGGCATCAACCTCGTCATCATCTATAACCTGCACAGATGTTGCCGGAACTTTTGGTTACTTGGCACCTGAATACTTCATGTATGGTAAAGTAAATGATAAGATTGATGTCTATGCATTTGGCGTGGTGCTTCTTGAGCTTCTTACGGGGAGAAAGCCTATAAGTGGTGACTATCCTAAAGGTCAAGAGAGCCTTGTCATGTGGGCAAGTCCAATTCTAAATAGTGGTAAGCTGTCACAATTGTTGGATCCTAGTTTGGGTGATAACTATGATCATGAAGAGATGGAAAGGATGGTTTTAGCAGCCACGCTTTGTATCAGACGTTCTCCAGGAGCTAGACCTCAAATGAGCCTTATCTCAAAGGTCCTTAAAGGCGATGCGGTTGTAATAAAGTGGGCAAGGCTAGAAATTAATGCTTTGAAAGCATCAGAATTGCTTGATGAAGAAGCTTGTCCACCTTCTAACTTACAATCACACCTTAATCTTGCATTGCTTGATGTCGATGATGACACACTCTCATTGTATAGTGTTGAGCAAAATGTCTCTTTGGAGGACTATTTGAGAGGCAGGTGGAGCCGTTCATCTAGCTTTGATTGA 2103 0.408 MIATHDGGSATSDGRTVVVGVKLDSQSHSTELLTWSLVNVAQPGDLIVALHVLRNDDIVNRDGKSSLFSLVKAFDSILSGYEGFCNLKQVDLKLKICRGSSVRRILVREANEYRATHVIVGKPQGLSKIRPTISIPRYCAKKLSKDCWVFAVDNGKVVFKRDGSPTNHVDLKGRRIGLLGSIQRTFSKSSKVLNDDMHEAILPDSSCYQAADQESYVGDDGDSEKNPLAMVPVKATEAGSREVTDLKPGWPLLHSRISTSDRRISERSLFRRISVVQWAMQLPSRTLSFDKDQFLGLDSKSGALVPVNAEIGTITSPERKSISVPKELEGLHEKYSSTCRLFNYQELVSATSNFLPENLIGKGGSSQVYKGCLPDGKELAVKILKPSDDVLKEFVLEIEIITALHHKNIISLIGFCFEDGNLLLVYDFLSRGSLEQNLQGNKKNPLEFGWTERYKVAMGVAEALEYLHNSSDQSVIHRDVKSSNVLLSEDFEPQLSDFGLAKWASTSSSSITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGRKPISGDYPKGQESLVMWASPILNSGKLSQLLDPSLGDNYDHEEMERMVLAATLCIRRSPGARPQMSLISKVLKGDAVVIKWARLEINALKASELLDEEACPPSNLQSHLNLALLDVDDDTLSLYSVEQNVSLEDYLRGRWSRSSSFD* 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5083 700 SUPERFAMILY Protein kinase-like (PK-like) 335 624 IPR011009 -
Mal1g5083 700 CDD STKc_IRAK 360 627 - -
Mal1g5083 700 Pfam Protein kinase domain 358 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g5083 700 PANTHER OS01G0253100 PROTEIN 8 694 IPR045271 GO:0004714|GO:0006468
Mal1g5083 700 Gene3D Phosphorylase Kinase; domain 1 319 428 - -
Mal1g5083 700 ProSitePatterns Protein kinases ATP-binding region signature. 360 382 IPR017441 GO:0005524
Mal1g5083 700 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 8 694 - -
Mal1g5083 700 CDD USP_Like 16 149 - -
Mal1g5083 700 ProSitePatterns Serine/Threonine protein kinases active-site signature. 475 487 IPR008271 GO:0004672|GO:0006468
Mal1g5083 700 ProSiteProfiles Protein kinase domain profile. 354 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g5083 700 SMART serkin_6 354 648 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g5083 700 Gene3D Transferase(Phosphotransferase) domain 1 429 634 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5083 Mal-Chr1 122379696 122383153 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5083 341 621 Trihelix Transcription Factor Family AT1G68690 46.154 2.62e-76 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Mal1g5083 Pkinase 7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5083 - - aprc:113846853 1054.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g5083 1 122379696 122383153 Mal1g5083 1 122379696 122383153 ECH