Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5082 ATGGATCAACACCACCACTTTCTCCACCACCACCAAGACCACCGTACACGTTACCCTCCACCACCTTCTCAATCTCATCACCATCTCCCTCCACCACCTTCTCTTCCACCTCCTCAACCTCTCCCTTACCGTACTTCTATTCACACCCCTCCTCTTCCTCCTCCACCCCCCTTTCATCAATCTCCTCAATTCCCTTTTTACCCTCTCGAACATCGCCGTGTCCTCCCTCAACCTACTTGGAACCCTAACCCTAATCCCGACGATCGCTTCCACCGTGAATCTCATCACCACCACCATCACCACCCTCCTCCGCCTTCTTATCCACCTCTACGATACGAATCTGAAAACCCTAAACCTAGGGAAACGTTTGTGTTCGCCAGAACCACCACCGACAACAGCAATTACCACCGTCAATTAACCACCGCTTCCACATCGAATCACGCTTATCCAGAACGCGACCATGTTTCCACCAGAATCGATTCCGATTCCATCAGAATTGATAACAGAAGATGGTTGGATGATAGAAAACTACAGAACTCTTCACCTTCTCGTTCGCCTTTTGAATTGGTGAATGATGAAATAAGTGCTTCTTTGAAACGTGATTATCGTGATTCTGAAACCGTTAGGTATAGTAATGGTAGTAACAATAGTGGTAGATCGAATAGCAGAGAGTTTAATCATCGTGAATTTAGTCGAACACCACCGAAGAAACAGATTCAAAAGAAGAGTGCTTTACTTAGGATTCAGACGGTAAAACCTAATCATAGGAACCGTGATGTTGAACAGTTACGTTATGTTACTGATTCTAACAGTAATTTCTTCAGGGGTAATGGTAAAGATCAACGTGGCGGTTACACGAAAGGTGAAGAGAGGAAAAAAGGGAGTCCTGTTGAAGTTGATGTTGATATTTCTTTTGAATCGAACGTTTTTGTTGCCAAGCATATTGTCACCGCGGCACCTTCAACTTCCGGTGTTGATGCAGGTTCTGTTAATGGTAAAATGTCTTCTAAAGTTGAAGTTTTGAATGATGAAAATCATACTTCGCAGAAGAGTATAGGTGATGGTTGTAATCCGAATGAGAAAAACGAGGGGTTAGTTTCTGTGGAAACTAGTGGTACGCGTACTCGTAAATTAGCATCTAAGGTTGTGAAGAAGAAGAAAATTGTTTCGGGTGGTGAAAATTTGAATGCTAATAGTAATACTTCTCGGAAGAGTGTAGGGGATGCTTGTAATTCTAATGAGAAAAAGGAGGCGGCAGTTTCTGTTGAAGCTAGTGGTAATTGTACTCGTAAATTGGCTTCTAAGGTTGTCAAGAAGAAGAAATTTGTTAAAAAAGTGGTGAAGAAAGGTTCTGTGAACCCTACTAAGTCGAGTGTGTTGGCTTCGCCTTCGGTTGCCAATGCAGTTGGTGGAACTGTGCAAGCAGATAGTGTGTCCAATGCTACGGAAACTTGTTTGCAGGAGAAAATCAATGCTGTTGATAAGGTGTCTGCGCCAGAAGATGAAGGGAATGTATTGGCTGAAGATAAAAAGGGGGATTTGTCCTTGCTGAGTTCGGGGCCAGAATGCAGGTCACAAGAATGTAAGAAGGATGAAGTTTCTGATATTGGGAAAGATTCCAGGTTTGAAAGAGGTGGAAGTATATCAAATACTCCATCTTGTGTTTCTAGTATTGTAAGTAAAAGTAGTTGTTCTGATTGTTTAGATGCATGTAATTCTGTCCATGACTTGCTTAGCTTGACAAATATTGACCAGGCTACTAAGTCATTAAATGGAAGTACTTCCGAAATCAACCACTTAGATTGTGGGAACAAGCAATTATGTCAGAGTGAAGTATCTTTATCGCCTGGGAAACATATAGATGTTGGATGTTCAGGGAGTAGTAATCTTGTAGATGTAGGTAATAGAGTGAATAATAATGTTATTTCTGCAGATATTATAAAGTCACATAATTCTGCTGATGACAGTGTTTGCGACTTCAATTCCAATGATCCTACAAGTTCAGGAAAGGAAACTACTGTTAATGATAGTGGGAATAATGACATTGATGGAGAGGCTTATTCTGAAAAGATGGCTCCTACGTTCAATCGGTGTACTACTTCGGAAGAAAATTCAGATGCAGCCATCCCTCTGCCAAGCAGTGGAATGGTTGTTTTTTCGAGTTTAGGAGATACTAGGATTCAGGATGGTCAAGATTGCCTACAAAATACCAGTGTACTTAAGCAGGGTTCTGATGATGGATTGTTTAGTTTGGAAGAGAGTATCATTGTTCACCAATTTGGTATCATGAAAGATGCTGAAAAGCAGGTGTCCCCTAGTGAAGTCCCCATATCTGCTGAGAATTGTGACATAGATAAAACATTTCCAAATTCTAATATTTCACTTGGATTTGATGTAAGGGATACAAGTAAGACAGAAAAGAGAGATGCTAGGACTCGTTTAAATTGTTTGACTTTGAATTTGGATGATATATCTCTTCCTCTAGTTAGCCATTCAAGTGATGCTGATAGAGGCTCAAGAATTTTATTGAAGGATCCATGTTCTTCAGAAGGCTTAGATCATTCTATTCAAAGCCTAGATTTTTACTCACTATCCAACCAGGTTGGGGACACTGCTTTACATGGGAAAAGAGCTTTTTCAGAGGCTGAATTTTGTGTTGCAAATAATGACAGTGATGATGAAAATAAGGTTTCACCTGTTCCTAAGAGGAAAAAAGTCACTGCTAGTCTCCCAAATTTAACTGAATTTCAATCTGAATTTAGTGATTCAATTATGGCTACCACATCTAATGCAGAAGTTCCTATTTGTTTCAGTGATAACCAAGAACATAAGAAAGACGACATTGCATCGTCAAGCATGGGTGTGAGTATTCAGTCTAATGCTCAATTGATGCCTTATTCAAGTGATACTGCTAAATTGTCTGACTGCATTTTCACTGGAGGATCATTTGAATCTACGGATGCAAATAGGGAAACCAAGAGTTCTGAGCATTTGGAATTGCAGCACTTGGATATGGTCTCTACACAATGTGAGGATTTGGCCATTCCAAATGTTCAGTTTTCAGTGTTGGGTTGTGAGCGGAATGACAATGTTACTCCAAATGAGCCTATAAGTAATACTCAAACTGACATTTTGGTTATTGGAAATATCACGGGGGAAAAGATAGATTCACAGGCTGCTGAAAACAATTACCATTATAGAGATGTTGTGCAAAGGTCTCCAAGGGCTGATATGCTATCTAATGATCTCGATATGAAGGGTAATTCACTTGCTCAGGAGAACCTTATGTCCTGCCCTGCCGATGGTGACGGAGTCACTATCAGTAATTCAAATAATGAATTGATTGAGGATTTGCCTGATGCTGTATCGGATATGTATTCTCAAGGGATGACATCTGAATTACCAGATAGAATGATTACTGAGTTTACAGCAACCGATGATGATGAAAACATTTGTGGGGATGAAGAAAATCCAAATAGCGTATCTATGGTCAAACATGGTTCTGACTCAGATGCTTTTACTTCATCAAAACAACATACTGAAAAAATTAGGAAGTCAGATCATGCAATTGGATGTAGTGACCCAATACCAAGGAATATAACGCCAGAACCGGCCCAAGTATATTCTAAAGTTTCGCCTCTGGTTCTAAATTCATCTTGTTCTGAATTAAATGGAAGCAAAAATCAGCCAGGCGGTGTCATCCCTAAAGCTTTCAAGGGTTATTCTTTTCCCTTTCCAAAGTCAAAGACAAAGACTCCTGCCTCTTCAGTCAATGCCTTAAAATCTCGAACTTGGCATCGGGCAGATAATAATAATCCTCCAGCTTCTCTACCTAGAGTCAAGCTTTCAGCAGGAATAGTTCCTCCCAAAAGGCCCATTCTCGAAAAGAAAAACTTCCAAAATACTTCTTACATTCGTAAAGGTAACAGTCTTGTTAGGAATCCTACTCCAGTTTCTGCTATACCTCAAATCTCCTCTATCAGTCTCGTGAGGAGACCTACTCCAGTTTCTGCTATACCTCAACTCTCCTCTACCAATCCACCATCTTTGGGCTTTTGTGAAATACCTAAGAGCACCAAACCTGAAAGCAGGGCTGTTTTGACAGACCAGCCAATCTACTCAAAAACAAATGTATCAAATGCTCATCTGCAGAGAACACTTCCTGTACCTATTGACACAAAATCAGAGGAAAATATATCTTCTCCTTTGCTAGAACCTCCTTCCAGTGGCAGCTGTGAAAATGCATCCGATCTTAGGAAGTTCATTGAAACTAACGATGCACCAGTCTCCTGTGAAGATGTACTAAAACAATGCGAAACTCCTGAAAATCAAATTGCTCCGTCTAGCAATGGGGAGTGTCAAGCTGCAGTAAATGATGTGAATATTTCTTCTTCGAACTCAAAAAGAATAGTTTACATAAAGCCTAAAACAAATCAATTGGTTGCAACTTCAAGTTCTTGTGATAATATTGTTTCTACTGATGACAAAGGCCAAACAGTCTTCCCTGATAGCTATTACAAGAGGAGAAAAAATCAATTGGTTAGGACTACATTTGAAAACCATGCCAACCAGACAGTTGCTATGCCTAATAACATTGTAAATTCTGACAGTCAAGGGGCTAGTAAAGTACTTTGCAACAGGAAGTTTACCAAGAGGCGGTCACATAAGGTAGCTGGAATTTCGAGCAAATCTTCAAGAGCCTCATTAGTGTGGACACTTGGTAGCAAAAAATCTTCTGGAAATGACAGGGACTCTTGGCATTATCAAAAGGTTTTACCACACTTGTTTCCATGGAAAAGAACAACATATTTAAGAAGCTTCATTCATAATTCTGCTTCAAGCTTCAATAGTTGTTCCTTATCTGCAGTCGGCAAGAAATTGCTTCTGTTGAGAAAGAGGGATACTGTATACACCAGGTCGACCCGTGGGTTTTCTCTTTGGAAATCCAAAGTTTTAGGCATCGGTGGGTCTAGTCTAAAATGGTCAAAATCCATCGAGAAGCACTCAAAGAAAGCTAATGAGGAAGCCACACTTGCTGTTGCTGCAGTTGAGAGGAAGAAGAGAGAGAAGAAAAATCCAGCTTGTGTTGGTCCTCAGACAAAGAGAGAACGGATATTTCGTGTTGGTTCAGTTCGCTACAGAATGGATCCTTCCAGGCGGACACTTCAGAGGATTTCAGATGATGAATCCATGTCCTCTGCCTCAATCAGTTCAGGTTTGGCTTCCAAAATAGGTTACATTCCAAGGAGATTGGTGATAGGAAACGATGAATATGTTCGAATTGGCAATGGAAACCAACTTATCAGAGACCCAAAGAAACGAACTCGAAAATTGGCAAATGAAAAAGTTAGATGGAGCTTGCACACTGCCAGACAGCGGTTGGCTCGTAAGCAGAAGTACTGTCTGTTTTTCACAAGATTTGGGAAATGTAACAAGGATGGAGGGAAGTGTCCTTACATTCATGATCCCTCAAAAATTGCTGTCTGTACCAAGTTCCTGAATGGTTTATGTTCTTCTCCAAACTGCAAATTGACTCATAAGGTTATTCCAGAGAGAATGCCTGATTGTTCATACTTTTTGCAAGGCCTATGCTCAAACGAAAATTGTCCATATAGACATGTCAATGTGAGCCCTAAGGCATCTATTTGTGAAGGATTTCTTAAGGGTTATTGTGCGGATGGGAATGAGTGTCGGAAGAAGCACAGCTACGTCTGTCCAAGTTTTGAAGCAACAGGGACCTGTACTGAAGGAACCAAATGCAAGCTTCACCACCCGAAAAAACAAAGCAAGGGAAAGAAAAGAAAGAGATCCGGAGATCAGAACAATGGTAGAGGGCGTTACTTTGGTTCTGTTCCCGTTGAAGTTTCTGAACCTGGAATTATGGTGGCTCCCAGCCATCCTCAACAGAATGAGGAACACGAAAATGAACTATCCGACTACATCAGTCTTGATGTGTATGAAGATGCGGCAGACACAGTTGACCAATCATTTGAGCTATCAACATTTTGTGACAATGATAGCATGGATCTTCAGTTGGATACTTCCGAGGAACTCATTAAACCTGTTTCTATTATAGCGAAGTTTGCTTTGCATTCTCAGTCCAGAAGCCTGCAAGCTTAG 6120 0.407 MDQHHHFLHHHQDHRTRYPPPPSQSHHHLPPPPSLPPPQPLPYRTSIHTPPLPPPPPFHQSPQFPFYPLEHRRVLPQPTWNPNPNPDDRFHRESHHHHHHHPPPPSYPPLRYESENPKPRETFVFARTTTDNSNYHRQLTTASTSNHAYPERDHVSTRIDSDSIRIDNRRWLDDRKLQNSSPSRSPFELVNDEISASLKRDYRDSETVRYSNGSNNSGRSNSREFNHREFSRTPPKKQIQKKSALLRIQTVKPNHRNRDVEQLRYVTDSNSNFFRGNGKDQRGGYTKGEERKKGSPVEVDVDISFESNVFVAKHIVTAAPSTSGVDAGSVNGKMSSKVEVLNDENHTSQKSIGDGCNPNEKNEGLVSVETSGTRTRKLASKVVKKKKIVSGGENLNANSNTSRKSVGDACNSNEKKEAAVSVEASGNCTRKLASKVVKKKKFVKKVVKKGSVNPTKSSVLASPSVANAVGGTVQADSVSNATETCLQEKINAVDKVSAPEDEGNVLAEDKKGDLSLLSSGPECRSQECKKDEVSDIGKDSRFERGGSISNTPSCVSSIVSKSSCSDCLDACNSVHDLLSLTNIDQATKSLNGSTSEINHLDCGNKQLCQSEVSLSPGKHIDVGCSGSSNLVDVGNRVNNNVISADIIKSHNSADDSVCDFNSNDPTSSGKETTVNDSGNNDIDGEAYSEKMAPTFNRCTTSEENSDAAIPLPSSGMVVFSSLGDTRIQDGQDCLQNTSVLKQGSDDGLFSLEESIIVHQFGIMKDAEKQVSPSEVPISAENCDIDKTFPNSNISLGFDVRDTSKTEKRDARTRLNCLTLNLDDISLPLVSHSSDADRGSRILLKDPCSSEGLDHSIQSLDFYSLSNQVGDTALHGKRAFSEAEFCVANNDSDDENKVSPVPKRKKVTASLPNLTEFQSEFSDSIMATTSNAEVPICFSDNQEHKKDDIASSSMGVSIQSNAQLMPYSSDTAKLSDCIFTGGSFESTDANRETKSSEHLELQHLDMVSTQCEDLAIPNVQFSVLGCERNDNVTPNEPISNTQTDILVIGNITGEKIDSQAAENNYHYRDVVQRSPRADMLSNDLDMKGNSLAQENLMSCPADGDGVTISNSNNELIEDLPDAVSDMYSQGMTSELPDRMITEFTATDDDENICGDEENPNSVSMVKHGSDSDAFTSSKQHTEKIRKSDHAIGCSDPIPRNITPEPAQVYSKVSPLVLNSSCSELNGSKNQPGGVIPKAFKGYSFPFPKSKTKTPASSVNALKSRTWHRADNNNPPASLPRVKLSAGIVPPKRPILEKKNFQNTSYIRKGNSLVRNPTPVSAIPQISSISLVRRPTPVSAIPQLSSTNPPSLGFCEIPKSTKPESRAVLTDQPIYSKTNVSNAHLQRTLPVPIDTKSEENISSPLLEPPSSGSCENASDLRKFIETNDAPVSCEDVLKQCETPENQIAPSSNGECQAAVNDVNISSSNSKRIVYIKPKTNQLVATSSSCDNIVSTDDKGQTVFPDSYYKRRKNQLVRTTFENHANQTVAMPNNIVNSDSQGASKVLCNRKFTKRRSHKVAGISSKSSRASLVWTLGSKKSSGNDRDSWHYQKVLPHLFPWKRTTYLRSFIHNSASSFNSCSLSAVGKKLLLLRKRDTVYTRSTRGFSLWKSKVLGIGGSSLKWSKSIEKHSKKANEEATLAVAAVERKKREKKNPACVGPQTKRERIFRVGSVRYRMDPSRRTLQRISDDESMSSASISSGLASKIGYIPRRLVIGNDEYVRIGNGNQLIRDPKKRTRKLANEKVRWSLHTARQRLARKQKYCLFFTRFGKCNKDGGKCPYIHDPSKIAVCTKFLNGLCSSPNCKLTHKVIPERMPDCSYFLQGLCSNENCPYRHVNVSPKASICEGFLKGYCADGNECRKKHSYVCPSFEATGTCTEGTKCKLHHPKKQSKGKKRKRSGDQNNGRGRYFGSVPVEVSEPGIMVAPSHPQQNEEHENELSDYISLDVYEDAADTVDQSFELSTFCDNDSMDLQLDTSEELIKPVSIIAKFALHSQSRSLQA* 2040
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5082 2039 MobiDBLite consensus disorder prediction 23 63 - -
Mal1g5082 2039 SMART c3hfinal6 1877 1903 IPR000571 GO:0046872
Mal1g5082 2039 SMART c3hfinal6 1904 1926 IPR000571 GO:0046872
Mal1g5082 2039 SMART c3hfinal6 1850 1875 IPR000571 GO:0046872
Mal1g5082 2039 SMART c3hfinal6 1824 1848 IPR000571 GO:0046872
Mal1g5082 2039 SMART c3hfinal6 1795 1823 IPR000571 GO:0046872
Mal1g5082 2039 MobiDBLite consensus disorder prediction 222 236 - -
Mal1g5082 2039 MobiDBLite consensus disorder prediction 1 116 - -
Mal1g5082 2039 MobiDBLite consensus disorder prediction 271 293 - -
Mal1g5082 2039 ProSiteProfiles Zinc finger C3H1-type profile. 1795 1824 IPR000571 GO:0046872
Mal1g5082 2039 PANTHER CCCH ZINGC FINGER 290 2026 - -
Mal1g5082 2039 ProSiteProfiles Zinc finger C3H1-type profile. 1877 1904 IPR000571 GO:0046872
Mal1g5082 2039 Gene3D - 1877 1940 - -
Mal1g5082 2039 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 3 290 2026 - -
Mal1g5082 2039 MobiDBLite consensus disorder prediction 657 685 - -
Mal1g5082 2039 Gene3D - 1822 1876 - -
Mal1g5082 2039 MobiDBLite consensus disorder prediction 657 682 - -
Mal1g5082 2039 MobiDBLite consensus disorder prediction 204 242 - -
Mal1g5082 2039 ProSiteProfiles Zinc finger C3H1-type profile. 1850 1876 IPR000571 GO:0046872
Mal1g5082 2039 MobiDBLite consensus disorder prediction 1181 1203 - -
Mal1g5082 2039 MobiDBLite consensus disorder prediction 1921 1948 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5082 Mal-Chr1 122368505 122377864 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Mal1g5082 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5082 - - mtr:MTR_1g029710 3181.73