Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5077 ATGTCAAAGTCTCCCTCTCCAGAACAACAGAGATCCATTTATTCTGATTCTCAGCCCATGGAATTCAATGAGGAAACAGGAATGGACGATCCAGAATCTACAATGGCAACAGTTGCTAATTTTTTGGAGCAACTGCATGCCAACATGTCATCACCACTTGAGAAAGAACTTATTACTGCACGATTATTAAGTGTTGCCAAGAGAAGAAAGGATGCTAGAGCACTTATTGGTTCTCATGCCCAAGCCATGCCATTGTTCATAAACATTCTCAGAAATGGAAACCCTCTTGCAAAAGTTAATGTAGCTTCCACTCTGAGTATCCTGTGCAAAGATGAAGACTTGAGGTTAAAAGTACTTCTTGGTGGTTGTATCCCACCATTACTGTCAGTTTTAAAATATGAATCCACTGATGCCAGGAAGGCAGCAGCTGAAGCAATATATGAAGTTTCCTCTGGTGGTCTTTCAGTTGATCATGTTGGTATGAAAATTTTTGTTACAGAAGGTGTAGTTCCAACCTTATGGAATCAACTAGATCCGCAGAACAAAGAAGACAAAGTTGTGGAGGGTTTTATTACTGGAGCATTGAGAAATCTATGTGGGGACAAAGATGATTATTGGAAAGCAACATTAGAAGCTGGAGGTGTGGATATCATTGTGGGTCTCTTGTATTCAGATAATTCTGTTTCTCAGTCTAATGCAGCTTCTCTGTTGGCACGTCTAATGCTGGCTTTCAGTGATAGCATCCCCAAAGTAATAGACTCTGGCGCAGTCAAAGCTTTACTTCGACTTATTGGTCAGGAAAATGATATTTCTGTACGAGCCAGTGCTGCCGATGCCCTAGAGGCCCTTTCTTCAAAGTCTACCATGGCTAAAAAGGCTATTGTTAATGCAGATGGTGTTCCAATCCTTATTGGAGCTATCGTTGCTCCTTCTACAGAGTGTATGCGAGGTGATGGTGGTCGGGCCTTGCAAGAGCATGCAACTCGAGCTTTAGCCAACATCTACGGGGGCATGTCTGCTTTAATACTATATCTTGGTGAACTTTCCCATTCTTCTCGTCTTGCTGTTCCAGTTGGTGATATAATTGGTGCTCTTGCTTATACGCTCATGGTCTTTGTGGAAAACCTTGATGTTGATGAGGAACATTTTGATGCAACTAAGATAGAGGATAATCTAGTAACTCTTTTAAAGCCTAGAGACAACAAGCTGATTCAAGAGCGTGTCCTCGAGGCTATGGCTAGCCTTTATGGAAACGTCTATCTCTCAAAGGGGCTCGTTCAAGCAGATTCAAAGAAGGTTCTCATTGGACTTATAACAATGGCTGCTCCTGATGTGCAAGAGTATCTGATACTTTCATTGACAAGCTTGTGTTGTGAAAGGATTGGAATATGGGAGGCCATAAAAAAACGAGAAGGTATCCAATTGCTGATATCATTGGTGGGATTATCCAGTGAGCAGCATCAAGAGTACTCAGTTCAATTGTTAGCGATCTTAACTCACCAGGTTGATGACAGCAAATGGGCAATCACTGCTGCTGGAGGGATTCCACCGTTGGTGCAGTTGTTGGAGACAGGATCACAAAAAGCAAGAGAGGAAGCAGCTAATGTTCTCTGGAGTTTGTGTTGTCACAGTGAAGATATTCGTGCCTGTGTTGAAAGTGCTGGAGCCGTACCGGCATTTTTGTGGCTTCTCAAGAGTGGTGGACCAAAAGGACAAGAAGCTTCTGCTATGGCACTCACAAAGCTTGTCCGAGTAGCTGATTCCCCCACAATTAATCAGCTATTAGCATTGCTACTCGGGGATTCTACAAGCTCGAAGGCCCATATAATTCGGGTTTTAGGTCACGTGCTTTCTATTGCGTCACAGAAGGATCTCCTTCAGAAGGGTTCTGCAGCCAATAAAGGATTGAGATCTCTTGTTCAAGTTCTCAATTCATCAAATGTGGAAACCCAAGAATATGCAGCTTCAGTCCTTGCTGATTTATTTATCACAAGACAAGACATGTGTGATAGTCTTGCAACTGATGAAATCGTGCTTCCTTGCCTGAAGCTTTTGACTAGCAAAAGTCAAGGTGTTGCTACTCAGTCCGCTCGAACCTTATGTGCTCTGTCTCGTCCAAACAAGAGCAAAGCTGCAAATAGGATGTCTTATATTGTAGAGGGTGATGTTGAACCACTAATCAAATTAGCTAAAACATCTTCTGTTGATGCTGCTGAAACTGCTGTTGCTGCATTGGCCAATCTTCTCTTTGATCCTTCTATTGCCGCTGCAGCTCTAGCTGAAGATGTTGTTTCAGCTTTAACAAGAGTTCTGGCAGAAGGATCCTTGGAAGGTAAACAAAATGCATCATGTGCACTTCATCAATTACTGAAGCATTTTCCAGTAGGCGACGTTCTCAAGGGGAATGCTCAATGCCGTTTTGCTGTACTTGCACTTGTTGATTCATTAAGAGCTATGGATATGGATGGAACTGATGCAGCAGATACTTTAGGAGCAATTGCACTGCTAGTCAGGACTAAACAGGGTGTCGACTTCACTTCCCATCCGTGGATAGCTCTGGCTGAAATACCATCAAGCATAGAACTTCTCATTTGCTGTTTGGCAGAGGGGCCTCCCCTTGTGCAGGATAAGGCAATTGAAATTCTGTCTAGGCTTTGTGGGGATCAGCCAGCTGTTCTTGGTGATTTGTTATTTGCTAGATCCAGATCCATTGTTTCATTGGCTAATAGAATAATAAACTCCTCCAGTTCAGAAGTGAAAGTTGGTGGAGCTTCCTTACTAATTTGTGCTGCAAAGGAGAAGAAAGAGCTTTCAATGGATTCACTTGACGCTTCTGGTTATCTAGAACAACTAATATACTCTTTAGTTGATATGGTGAAGCAGAGTTGTAGCTGTTCTTCATTAGATATCGAAGTATTCACCACTAAAGGTTTTATGGAGAGGAATGCATTTCAAGAAGTTGAAGTGTTTGATATTCCTGATCCGGCTGTTGTCTTGGGAGGTACTGTTGCCCTGTGGTTGCTCTCAATTATTGTTTCTTTTCATTCGAAGAGCAAAATCACAGTTATGGAAGCTGGTGGACTTGAAGCTCTCTGTAACAAACTTGCAAGACATACTTCAAATCCACAGGCAGAATATGAGGATACAGAAGGAATATGGATCAGTGCCTTGTTCTTGGCCATTTTATTTAAAGATGCAAACATCATTCTATCATCAGCAACAATGAAAATTATACCTTCTATCGCTCTTCTGCTAAGATCCGAAGAAGTAATTGATAAATATTTTGCTGCCCAGGCTTTGGCTAGTCTTGTCTGTAATGGTAATAGAGGGATAAATCTTGCCATTGCAAATTCTGGCGCTGTTGCTGGATTGATAACTGTTATTGGGCATATTGAGTCAGATATGCCAAATCTCGTGACTTTATCAGAAGAATTTTCTTTGGTGCAAAACCCTGATCAAGTTGTTTTGGATCACCTTTTTGAAATTGAAGATGTAAGATTGGGATCTACTTCACGGAAATCTATACCCCTCTTAGTGGACCTCTTAAGACCAATACCAGAAAGGCCTAATGCTCCACCAGTTGCTGTTAGACTCTTGATATCCATCGCAGATGGAAGTGATACAAATAAATTAATTCTGGCAGAAGCTGGAGCTCTGGAAGCTTTGAACAAATACCTGTCCTTGAGCCCTCAAGACTCAACTGAGACTGCTATTTCAGAGTTACTGAGAATTTTATTTTGTAACTCTGACCTCATTAAACATGAAGCATCAACAAGTTCATTGAACCAACTCATAGCTGTTTTGCGTCTTGGATCAAGAAATGCTAGATACAGTGCAGCAAGAGCACTCCATGAACTTTTTGATGCCGACTATATCAGAGATTCAGAATTAGCTAAACAGGCCATTCAGCCATTGGTTGACATGCTGAACACAACATCAGGGAGTGAGCAGGAAGCTGCTCTCATGGCCTTGATCAAGTTAACATCAGGAGATTCGTCAAAAGCATGTATTTTTACTGATGTGGAAGGGAATCCACTTGAAAGTTTATACAAAGTACTGTCTTCTGCTTCTACTTTGGAACTGAAGAGCCATGCTGCACATCTCTGCTATGCTCTTTTTGGTAATAGCAAGATCAGAGCAAACCCTGTTGCATCAGAATGCCTAAAACCCCTTATATCACTAATGCAGTCTGATTATGATACAGCAATAGAATATGGGGTGTGTGCTTTTGAGAGATTGTTGGAAGATGAACAGCAGGTGGAGCTTGCAGCAGCCTATAATATTGTGGATCTCCTTGTCAGTTTGGTTTCTGGTGCAAACTACCAGCTTATTGAGGCCACTATATCTGTTCTAATTAAATTGGGTAAAGACAGAACTCCTAGCAAACATGACATGGTCAAAGCTGGCATTATTGATAATTGTCTCAAGCTATTTCAATCAGCACCTAGCTCATTATGCTCCACAATAGCCGAGCTTTTTCGCATTTTAACTAATAGTAGTGCAATTGCTAGAAGTTCAGATGCTGCAGAAATTGTAGAACCCCTTTTCAATGTTTTGCTCCGTCAGGATTTCAACATATGGGGACAGCATAGTGCCTTACAAGCACTTGTAAATATATTGGAGAAACCGCAAAGTCTTGCTTCCTTAAAGCTTACGCCTAGCCAAGTCATCGAACCCTTGATTTCTTTTCTGGAGTCCCCATCCCAAGATATTCAGCAGCTTGGCACAGAACTGTTATCTCATCTTCTTGCACAGGAACACTTTCAGCAAGATATTACAACAAAGAATGCAGTTGTGCCCCTTGTACGGCTTGCAGGAATTGGAATTTTAAATTTACAGCAGACAGCAATAAAAGCATTGGAAAAAATTTCTACAAGCTGGCCAAAGGCTGTTGCTGATGCGGGAGGTATTTTTGAGCTTGCAAAAGTTATTATTCAAGATGATCCTCAGCCACCGCATGCACTCTGGGAATCAGCTGCTTTAGTTCTCTCTAATGTATTACGTTCCAATGCTGATTACTATTTTAAAGTTCCTGTGGTGGTTCTTGTAAAACTCTTGCACTCAACACTTGATGGTACAATTAGCTTAGCTCTAAATGCTTTAGTAATTTATGAAAGAAGCTATGGTTCAAGTGCTGAAGAGATGATGGAAGCTGGAGCTATGGATGCTCTGTTGCATCTTATAAGATCTCATCAATGTGAAGAAGCATCTGGTAGATTACTTGAAACTTTATTTAACAATGTCAGAGTACGGGAGATGAAGATATCTAAGTATGCTATAGCGCCTTTGTCCCAATATCTGTTAGATCCACAAACCAGATCACAGTCTGGCAAGCTTCTTGCTGCTTTAGCTCTGGGAAATCTTTCCCAGCATGAACGACATGCTAGAGCCAGTGACTCTGTATCTGCATGCCGTGCATTGATAAGTATACTCGAAGATCAGCCAACTGAAGAAATGACAATGGTGGCTATATGCGCGTTACAAAACTTTGTCATGAACAGCAGGACCAATAGACGCGCTGTTGCTGAAGCTGGGGGCATACTGGTGATTCAGGAATTGCTACTGTTTCCAAATACAGAGGTTGCTGGACAAGCAGCTCTATTGATCAAATTTTTGTTTTCTACCCACACATTACAAGAATATGTGTCAAATGAGCTGATCAGATCTTTGACAGCTGCACTCGAAAGGGAGTTGTGGTCGACAGCCACAATCAATGAGGAGGTTTTGAAAACACTTCATGTGATATTCATAAACTTTCCTAAGCTCCACATATCTGAAGCAGCAACCCTTTGCATTCCTCATTTGGTAGGGGCACTTAAATCTGGGAGTGAAGCGGCTCAAGACTCCGTACTTGACACCTTTTTCTTGCTTAAACAATCTTGGTCTACCATGCCAATAGATATAGCAAAATCTCAAGCCATGACGGCCGCTGAAGCCATCCCCATATTGCAAATGCTCATGAAAACCTGCCCACCAAGTTTCCATGAGAGGGCAGATACTCTTCTGCACTGCTTACCAGGTTGTTTGACTGTCACCATTAAACGAGGAAACAACCTCAAGCAAACTATGGGAAGCACTAATGCATTTTGCCAGTTGACAATAGGCAATGGTCCTCCAAAACAAACCAAGGTAGTGAACCACAGTACTTCTCCGGAATGGAAAGAAGGATTCACATGGGCATTTGATGTACCTCCCAAGGGCCAAAAGCTCCATATCGTATGCAAAAGCAAGAATACTTTTGGAAAGACAACTCTTGGAAGAGTGACCATCCAAATTGATAAAATTGTGACGGATGGGGTTTATAGTGGATTATTCAGTCTTAGTCATGACGGCAACAAAGATGGTTCTTCCCGAACACTTGAAATTGAGATTATATGGTCCAACAGAATTTCTAATGATGACATTTGA 6408 0.4168 MSKSPSPEQQRSIYSDSQPMEFNEETGMDDPESTMATVANFLEQLHANMSSPLEKELITARLLSVAKRRKDARALIGSHAQAMPLFINILRNGNPLAKVNVASTLSILCKDEDLRLKVLLGGCIPPLLSVLKYESTDARKAAAEAIYEVSSGGLSVDHVGMKIFVTEGVVPTLWNQLDPQNKEDKVVEGFITGALRNLCGDKDDYWKATLEAGGVDIIVGLLYSDNSVSQSNAASLLARLMLAFSDSIPKVIDSGAVKALLRLIGQENDISVRASAADALEALSSKSTMAKKAIVNADGVPILIGAIVAPSTECMRGDGGRALQEHATRALANIYGGMSALILYLGELSHSSRLAVPVGDIIGALAYTLMVFVENLDVDEEHFDATKIEDNLVTLLKPRDNKLIQERVLEAMASLYGNVYLSKGLVQADSKKVLIGLITMAAPDVQEYLILSLTSLCCERIGIWEAIKKREGIQLLISLVGLSSEQHQEYSVQLLAILTHQVDDSKWAITAAGGIPPLVQLLETGSQKAREEAANVLWSLCCHSEDIRACVESAGAVPAFLWLLKSGGPKGQEASAMALTKLVRVADSPTINQLLALLLGDSTSSKAHIIRVLGHVLSIASQKDLLQKGSAANKGLRSLVQVLNSSNVETQEYAASVLADLFITRQDMCDSLATDEIVLPCLKLLTSKSQGVATQSARTLCALSRPNKSKAANRMSYIVEGDVEPLIKLAKTSSVDAAETAVAALANLLFDPSIAAAALAEDVVSALTRVLAEGSLEGKQNASCALHQLLKHFPVGDVLKGNAQCRFAVLALVDSLRAMDMDGTDAADTLGAIALLVRTKQGVDFTSHPWIALAEIPSSIELLICCLAEGPPLVQDKAIEILSRLCGDQPAVLGDLLFARSRSIVSLANRIINSSSSEVKVGGASLLICAAKEKKELSMDSLDASGYLEQLIYSLVDMVKQSCSCSSLDIEVFTTKGFMERNAFQEVEVFDIPDPAVVLGGTVALWLLSIIVSFHSKSKITVMEAGGLEALCNKLARHTSNPQAEYEDTEGIWISALFLAILFKDANIILSSATMKIIPSIALLLRSEEVIDKYFAAQALASLVCNGNRGINLAIANSGAVAGLITVIGHIESDMPNLVTLSEEFSLVQNPDQVVLDHLFEIEDVRLGSTSRKSIPLLVDLLRPIPERPNAPPVAVRLLISIADGSDTNKLILAEAGALEALNKYLSLSPQDSTETAISELLRILFCNSDLIKHEASTSSLNQLIAVLRLGSRNARYSAARALHELFDADYIRDSELAKQAIQPLVDMLNTTSGSEQEAALMALIKLTSGDSSKACIFTDVEGNPLESLYKVLSSASTLELKSHAAHLCYALFGNSKIRANPVASECLKPLISLMQSDYDTAIEYGVCAFERLLEDEQQVELAAAYNIVDLLVSLVSGANYQLIEATISVLIKLGKDRTPSKHDMVKAGIIDNCLKLFQSAPSSLCSTIAELFRILTNSSAIARSSDAAEIVEPLFNVLLRQDFNIWGQHSALQALVNILEKPQSLASLKLTPSQVIEPLISFLESPSQDIQQLGTELLSHLLAQEHFQQDITTKNAVVPLVRLAGIGILNLQQTAIKALEKISTSWPKAVADAGGIFELAKVIIQDDPQPPHALWESAALVLSNVLRSNADYYFKVPVVVLVKLLHSTLDGTISLALNALVIYERSYGSSAEEMMEAGAMDALLHLIRSHQCEEASGRLLETLFNNVRVREMKISKYAIAPLSQYLLDPQTRSQSGKLLAALALGNLSQHERHARASDSVSACRALISILEDQPTEEMTMVAICALQNFVMNSRTNRRAVAEAGGILVIQELLLFPNTEVAGQAALLIKFLFSTHTLQEYVSNELIRSLTAALERELWSTATINEEVLKTLHVIFINFPKLHISEAATLCIPHLVGALKSGSEAAQDSVLDTFFLLKQSWSTMPIDIAKSQAMTAAEAIPILQMLMKTCPPSFHERADTLLHCLPGCLTVTIKRGNNLKQTMGSTNAFCQLTIGNGPPKQTKVVNHSTSPEWKEGFTWAFDVPPKGQKLHIVCKSKNTFGKTTLGRVTIQIDKIVTDGVYSGLFSLSHDGNKDGSSRTLEIEIIWSNRISNDDI* 2136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5077 2135 SUPERFAMILY ARM repeat 1587 2005 IPR016024 -
Mal1g5077 2135 Gene3D - 1165 1343 IPR011989 -
Mal1g5077 2135 Gene3D - 1344 1605 IPR011989 -
Mal1g5077 2135 Gene3D - 364 633 IPR011989 -
Mal1g5077 2135 CDD C2 2009 2099 - -
Mal1g5077 2135 SMART C2_3c 2008 2104 IPR000008 -
Mal1g5077 2135 Pfam Armadillo/beta-catenin-like repeat 506 541 IPR000225 GO:0005515
Mal1g5077 2135 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 255 299 IPR000225 GO:0005515
Mal1g5077 2135 PANTHER PROTEIN CELLULOSE SYNTHASE INTERACTIVE 1 15 2133 IPR044297 GO:0008017|GO:0010330|GO:0051211|GO:2001006
Mal1g5077 2135 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2006 2112 IPR035892 -
Mal1g5077 2135 Gene3D - 1609 2007 IPR011989 -
Mal1g5077 2135 Gene3D C2 domain 2008 2133 IPR035892 -
Mal1g5077 2135 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 513 555 IPR000225 GO:0005515
Mal1g5077 2135 Pfam C2 domain 2008 2107 IPR000008 -
Mal1g5077 2135 ProSiteProfiles C2 domain profile. 1988 2105 IPR000008 -
Mal1g5077 2135 PANTHER - 15 2133 - -
Mal1g5077 2135 SUPERFAMILY ARM repeat 857 1329 IPR016024 -
Mal1g5077 2135 MobiDBLite consensus disorder prediction 1 31 - -
Mal1g5077 2135 Gene3D - 634 974 IPR011989 -
Mal1g5077 2135 Gene3D - 987 1153 IPR011989 -
Mal1g5077 2135 SUPERFAMILY ARM repeat 217 1628 IPR016024 -
Mal1g5077 2135 SMART arm_5 111 151 IPR000225 GO:0005515
Mal1g5077 2135 SMART arm_5 287 336 IPR000225 GO:0005515
Mal1g5077 2135 SMART arm_5 1015 1064 IPR000225 GO:0005515
Mal1g5077 2135 SMART arm_5 244 285 IPR000225 GO:0005515
Mal1g5077 2135 SMART arm_5 710 750 IPR000225 GO:0005515
Mal1g5077 2135 SMART arm_5 1746 1790 IPR000225 GO:0005515
Mal1g5077 2135 SMART arm_5 1375 1415 IPR000225 GO:0005515
Mal1g5077 2135 SMART arm_5 1416 1456 IPR000225 GO:0005515
Mal1g5077 2135 SMART arm_5 544 584 IPR000225 GO:0005515
Mal1g5077 2135 SMART arm_5 1206 1246 IPR000225 GO:0005515
Mal1g5077 2135 SMART arm_5 157 200 IPR000225 GO:0005515
Mal1g5077 2135 SMART arm_5 623 663 IPR000225 GO:0005515
Mal1g5077 2135 SMART arm_5 665 705 IPR000225 GO:0005515
Mal1g5077 2135 SMART arm_5 502 542 IPR000225 GO:0005515
Mal1g5077 2135 SMART arm_5 1289 1329 IPR000225 GO:0005515
Mal1g5077 2135 SMART arm_5 458 500 IPR000225 GO:0005515
Mal1g5077 2135 SMART arm_5 202 242 IPR000225 GO:0005515
Mal1g5077 2135 SMART arm_5 1543 1584 IPR000225 GO:0005515
Mal1g5077 2135 SMART arm_5 1834 1874 IPR000225 GO:0005515
Mal1g5077 2135 SMART arm_5 1458 1498 IPR000225 GO:0005515
Mal1g5077 2135 SMART arm_5 751 791 IPR000225 GO:0005515
Mal1g5077 2135 SMART arm_5 69 110 IPR000225 GO:0005515
Mal1g5077 2135 SUPERFAMILY ARM repeat 71 308 IPR016024 -
Mal1g5077 2135 MobiDBLite consensus disorder prediction 1 22 - -
Mal1g5077 2135 Gene3D - 29 346 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5077 Mal-Chr1 122298544 122308656 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5077 460 661 U-box Gene Family AT3G46510 30.189 4.76e-12 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5077 - - gmx:100796864 3581.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g5077 1 122298544 122308656 Mal1g5077 1 122298544 122308656 ECH