Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5074 ATGCTCGCTAGTGCTCTGGCGAGAGTCAACCTCGGCGGCACCACTGGAGGGCCTCGTCGTGGCAAGGCCGTCCGTGAAGCCGCCGATCGAGTTCTCGCCGTGGCCGCCAAAGGAAGAACAAGGTGGAGCCGGGCCATACTAAAAAACAAGCTCAGACTCAAATTCAGAAAACAGAAGAGACATCAACAGAACCGGGCTGTTGGCCCAGCCCGGTCCAAAAAATCCCGGTTCGGTGTTTTACGTCTTAAAGGAAAAACTCTTCCAGCGGTTCAGAAAAAAGTTAAAATTCTGGGCCGGTTAGTTCCCGGTTGTAGAAAAGAATTGTTACCGGTTATTCTTGAAGAAGCTATTGATTATATACCAGCTCTTGAGATGCAAGTTCGTGCCATGTCAACCCTAGCTGATTTACTCTTCGGTGCTACCTCTTCTTCCGCCGCCGCCGGCGGTGGCAGCGGCTCCGGCTTCCCGCCGGCGAGTTAA 480 0.5312 MLASALARVNLGGTTGGPRRGKAVREAADRVLAVAAKGRTRWSRAILKNKLRLKFRKQKRHQQNRAVGPARSKKSRFGVLRLKGKTLPAVQKKVKILGRLVPGCRKELLPVILEEAIDYIPALEMQVRAMSTLADLLFGATSSSAAAGGGSGSGFPPAS* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5074 159 PANTHER MYC-TYPE, BASIC HELIX-LOOP-HELIX (BHLH) DOMAIN-CONTAINING PROTEIN-RELATED 2 152 - -
Mal1g5074 159 CDD bHLH_AtIBH1_like 79 134 IPR044549 GO:0006355
Mal1g5074 159 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 2 152 IPR044660 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5074 Mal-Chr1 122048786 122049648 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5074 19 133 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G17100 60.331 4.61e-43 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5074 - - gmx:100792237 200.29