Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5072 ATGGCGTTTTCTGAAGTCAACAAAGAAGTGTTTGATTCAAAAGAAGCTTTAGCAACGGTTAAGCATCTGAGAGTAACATATGACTCTGGTAAAACTCGAAGCTACGAATGGAGAGTTTCTCAGTTGAAGGCACTTGTGGAGCTAACTGAAAAGCACGAGGAAGAGATTGTTAAAGCTCTTTACTCTGACTTATCCAAATCTGAAGCTGAATCCATCATCCAAGAGATTTCTTTGTTGAAAAACTCATGTAAAACTGCACTCAAGGAATTGAAGCATTGGATGGCTCCGGAAAAGGTCAAAACATCACTCACAACTTTTCCTTCTTCAGCTGAAATAGTTTCTGAACCACTTGGAGTTGTGTTGGTCATCTCTGCATGGAACTATCCATTTTTGTTATCACTTGATCCAGTCATTGGAGCTATTGCAGCTGGTAATGCCGTGGTCTTAAAGCCATCAGAAATTTCTCCAGCCACATCATCATTGCTGGCAAAACTGTTAGGGGAATACATGGATAACTCATCTATAAGAGTTGTTGAGGGGGCAGTTGATGAAACATCTGCATTACTGCAACAAAAGTGGGACAAAATTTTCTACACAGGTAATGGAAGAGTGGCACGCATTGTGATGGCTGCTGCTGCTAAGCACCTTACACCAGTTGTGCTCGAGCTTGGAGGTAAATCACCAGTTGTTGTTGATTCAAGTATCAACTTACAGGTAGCAGCTAGAAGGATAATTTCTGGAAAGTGGGGTTGCAACAATGGACAAGCTTGCATTTCTCCAGATTATATCATAACAACAAAAGACTATGCTCCTAAATTGGTGGATGCTCTAAAGGCTGAATTGGAGCAATTTTATGGAAAGAATCCATTGGAATCAAAAGATTTGTCGCGTATTGTAAACTCGAACCACTTTGCTCGCTTGACAAAGCTTTTGGATGATGATAAAGTTTCTGGTAAGATTGTTCATGGAGGTGAAAAGGATGAAAGCAAATTGAGGATTAGCCCTACTATTCTATTAGATGTCCCGCGCGATTCTCTGATAATGAGCGAAGAGATATTTGGTCCGTTACTTCCCATCATCACGGTCGATAAACTAGATGAAAGCTTTGATGTGATAAATTCAGGAACAAAGCCTCTTGCTGCATATATATTTACAAACAACAAGGCGCTCAAGGAGAAGTTTGTTAAGACTGTTTCTGCTGGTGGTGTAGTCATCAATGACACTACTCTACACCTTTCACTTCATACTTTGCCTTTTGGAGGAGTAGGTGAGAGTGGAATTGGTTCATATCATGGGAAATTCTCATTTGATGTGTTTAGCCACAAAAAAGCAGTTCTTTATCGCAGTTTTTTCGGTGATGCTCCTATAAGGTATCCACCATACACAAATACAAAGATGAGATTGTTGAAGGCTCTCATGGGTGGTGGCTTACTCGATATAATTCGTGCCATATTTGGAAAGTCCTAG 1467 0.4029 MAFSEVNKEVFDSKEALATVKHLRVTYDSGKTRSYEWRVSQLKALVELTEKHEEEIVKALYSDLSKSEAESIIQEISLLKNSCKTALKELKHWMAPEKVKTSLTTFPSSAEIVSEPLGVVLVISAWNYPFLLSLDPVIGAIAAGNAVVLKPSEISPATSSLLAKLLGEYMDNSSIRVVEGAVDETSALLQQKWDKIFYTGNGRVARIVMAAAAKHLTPVVLELGGKSPVVVDSSINLQVAARRIISGKWGCNNGQACISPDYIITTKDYAPKLVDALKAELEQFYGKNPLESKDLSRIVNSNHFARLTKLLDDDKVSGKIVHGGEKDESKLRISPTILLDVPRDSLIMSEEIFGPLLPIITVDKLDESFDVINSGTKPLAAYIFTNNKALKEKFVKTVSAGGVVINDTTLHLSLHTLPFGGVGESGIGSYHGKFSFDVFSHKKAVLYRSFFGDAPIRYPPYTNTKMRLLKALMGGGLLDIIRAIFGKS* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5072 488 CDD ALDH_F3FHI 19 447 - -
Mal1g5072 488 PANTHER ALDEHYDE DEHYDROGENASE 7 488 - -
Mal1g5072 488 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 221 228 IPR029510 GO:0016491
Mal1g5072 488 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 225 425 IPR016163 GO:0016620
Mal1g5072 488 Pfam Aldehyde dehydrogenase family 16 445 IPR015590 GO:0016491
Mal1g5072 488 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 26 443 IPR016162 GO:0016491
Mal1g5072 488 SUPERFAMILY ALDH-like 18 462 IPR016161 GO:0016491
Mal1g5072 488 PIRSF ALDH 4 480 IPR012394 GO:0006081
Mal1g5072 488 PANTHER ALDEHYDE DEHYDROGENASE 7 488 IPR012394 GO:0006081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5072 Mal-Chr1 121950393 121976465 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5072 76 486 Aldehyde Dehydrogenase Gene Family AT1G44170 75.182 0.0 667