Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5067 ATGTCATCCACTAATGAATCCTATTTCATCCATATTGAAGAATCCCAAGACACCATTCCACAAAATTTTTGTCCACATGAATGTTTCCTCATTAAACTTTACCACTTCCACTCCACTTCATTCAACCATTATTCCTTCCTCATTCCTAGTAACATTTTATGTGATTATGATGAATTTGAATCCGTGGATCCAGAAAGTTTATCCAATACCTTTTTGCGCAACACTTTCTCGTCTGTGCCGATTCCTTCTGATGTGTTGGAACATACTCTACTTCTTATGGGTGACTATGCTAGGCATATGAACCGAGTCAACTTCGAAGGATATAGAATATTGGAGATGGATGTCTTGGTTAACGAAAATGGATCTATTATGACCCTAGAGAAGGTCAAATTGGATGATATTGGTACTACTTGTTCAATGGAACAATGTGCAATTTGTTTGGAAGAATTTTGTTTTGGATCAGAAGAAGTGCAACACATTGTTCGTACCAAGTGCATGCATCTTTTCCATGAGCAATGTATTGCTCGGTGGCTTAAGCAATGTGGCATTACCAATCGACAATATTCATGCCCATTGTGTCGTTCCCAAATTCAATGA 597 0.3786 MSSTNESYFIHIEESQDTIPQNFCPHECFLIKLYHFHSTSFNHYSFLIPSNILCDYDEFESVDPESLSNTFLRNTFSSVPIPSDVLEHTLLLMGDYARHMNRVNFEGYRILEMDVLVNENGSIMTLEKVKLDDIGTTCSMEQCAICLEEFCFGSEEVQHIVRTKCMHLFHEQCIARWLKQCGITNRQYSCPLCRSQIQ* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5067 198 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 118 198 IPR013083 -
Mal1g5067 198 SUPERFAMILY RING/U-box 128 197 - -
Mal1g5067 198 Pfam Ring finger domain 142 194 IPR001841 -
Mal1g5067 198 PANTHER RING ZINC FINGER PROTEIN-RELATED 120 197 - -
Mal1g5067 198 SMART ring_2 143 193 IPR001841 -
Mal1g5067 198 ProSiteProfiles Zinc finger RING-type profile. 143 194 IPR001841 -
Mal1g5067 198 PANTHER ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN 120 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5067 Mal-Chr1 121860415 121861011 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5067 141 197 C3H Transcription Factor Family AT4G12190 40.351 1.76e-08 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5067 - K17821 mtr:MTR_1g029910 286.574