Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5052 ATGGCAAGTGCTAGTGCTAGTTTTGTTCCATTGATATTATTGATTCTGGTGCAACTAGCCTATGCATGGATGAATATTTCTTCAAAACTTGCTATTCTAGGTGGCATGAACCCTCTTATCCTTGTTTCATATCGTCAAATCTTTGCATTTGTTTCCATTGCTCCCTTTGCTTATTGGCTTGAACGTGATATGGTTCCAAAGATGACAAAACGCATTATGGTTCAACTATTGTTATCTTCCTTAACAGGAGTAACAGGAAGTCAAATTCTATATTTCATGGGACTAAAATATTCAACTGCAACAATTGCATGTGCACTCACAAATTTGGACACAGCTTTTACATTTGTTCTTGCAATTCTCTTTAGACAAGAGAATTTGGGAATAAAGAAGAAAAGTGGTGTGGCAAAGGTGGTAGGAACAGTTATGTGTGTTGGTGGAGCTATAGTTTTATCATTTTATCATGCAAAAGTAATGGATATACCTGAATCAAAGATTCATTGGAGTTATGCAGATAATCTTGAACGTGGTGCTCATAATAACTCTTCTGCACAATCTAACTCACTTCTAGGGCCTGTGCTCTTAATTCTTAATGCTCTTGTTTGGTCACTATGGTTCATCATTCAAGCAGATATGAGCAAGACTTTTCCAGTACCATATACAAGCACAGCATACACATGCTTGTTAGGAAGTTTGCAGTGTGTCTTGAGTGCCTTATGTTTAGATCATAGTGCCTCAGCTTGGTCACTGCATGACACTATGAGACTTACCTCTTCTCTTTATGCTGGAGTAATTTGCACTGGGATATCATTTCCTATAATTTCATGGGCCATTGAAAGAAAAGGGCCTATTTATGTTTCTGTATTCACCCCCTTACAGCTTATTGTCACAGCTTTTATTAGTTGGGCTTTTATTAGAGAGAAATTATACGTTGGAACTGCAATAGGGTCTTTGCTTATTGTTGGTGGGCTATATGTTTTTCTGTGGGGAAAGAGCAAAGAGGTTACAATTAAGAAGAATGATGAAGCTCTAGTGATGGCATTGCCACCATCAATTAAGGATGATGAAGTTCTGTGA 1074 0.3762 MASASASFVPLILLILVQLAYAWMNISSKLAILGGMNPLILVSYRQIFAFVSIAPFAYWLERDMVPKMTKRIMVQLLLSSLTGVTGSQILYFMGLKYSTATIACALTNLDTAFTFVLAILFRQENLGIKKKSGVAKVVGTVMCVGGAIVLSFYHAKVMDIPESKIHWSYADNLERGAHNNSSAQSNSLLGPVLLILNALVWSLWFIIQADMSKTFPVPYTSTAYTCLLGSLQCVLSALCLDHSASAWSLHDTMRLTSSLYAGVICTGISFPIISWAIERKGPIYVSVFTPLQLIVTAFISWAFIREKLYVGTAIGSLLIVGGLYVFLWGKSKEVTIKKNDEALVMALPPSIKDDEVL* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5052 357 SUPERFAMILY Multidrug resistance efflux transporter EmrE 232 331 - -
Mal1g5052 357 Pfam EamA-like transporter family 11 150 IPR000620 GO:0016020|GO:0016021
Mal1g5052 357 Pfam EamA-like transporter family 189 327 IPR000620 GO:0016020|GO:0016021
Mal1g5052 357 PANTHER WAT1-RELATED PROTEIN 10 341 IPR030184 GO:0016021|GO:0022857
Mal1g5052 357 Gene3D - 223 330 - -
Mal1g5052 357 PANTHER WAT1-RELATED PROTEIN 10 341 - -
Mal1g5052 357 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5052 Mal-Chr1 121528160 121530246 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5052 4 330 Nodulin-like Gene Family AT1G09380 55.963 1.05e-131 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5052 - - gmx:100798142 456.447