Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5046 ATGGCCGATATATGTGATAAAATGAGCAAGGGGCTACGCAAAATTAAGCCTTACCTTGCTATGGTGTCCCTTCAATTTGGCTATGCAGGAATGTACATCATCACTATGGTTTCATTCAAGCATGGAATGAGTCATTGGGTACTCTCCGTGTACCGTCATGTAGTCGCGACTATCTTCATGGCCCCTTTTGCTCTTGTCCTCGAAAGAAAAATTAGGCCAAAGATGACACTCCCCATCTTCTTGAGGTTGGCAGTTCTTGGTTTCCTTGAGCCAGTGCTTGATCAAAATTTGTACAACTTGGGAATGAAGAACACCTCAACAACGTTTGCATCTGCCACTGTTAACATTCTCCCAGCTATTACTTTTATAATGGCAATCATTTTCAGGTTAGAAACAGTTAACTTGAAAAAAATCCACAGCATAGCAAAGGTAGTTGGAACAGTAGTAACTGTATCAGGAGCAATGGTGATGACATTGTACAAAGGCCCTGCCTTTCAGATCATAAAGGGACAATCATCAAGTCAGCATGAAAGTGGAAGCACAGAACCCTCTGAACAAAACTTTGTGCTTGGCACTATAATGCTCATTTCAAGTTGTGGTGGTTGGGCTAGTTTCTTTATCTTGCAATCTTTCACTCTCAAGATGTACCCAGCAGAGCTCTCTATGACAGCTTGGATTTGCTTTTTGGGTATCTTTGAAGGTGGAATTGCCACTCTTATATTTGAACGTGATTTCAGTGTCTGGTCCTTGGGTTTTGACTCTAGGCTTCTTGCATGTGTTTACTCTGGTATTGTGTGCTCTGGAATGGCATATTATGTACAAGGAGTTGTGACAAGAGAACGTGGCCCTGTGTTTGTTACTTCCTTCAGTCCTTTATGTATGATCATCACTGCTGCATTGGGTTCCATTGTCTTAGCTGAGCAAACACATTTGGGAAGTATAATTGGAGCTATTATCATTGTGTGTGGACTTTACACTGTGGTATGGGGAAAAAGCAAAGACAGTGTGAACAATACAATTAATGCACCAAAAAGTGAGGGACAAGAATTGCCAATAAAGGATGGTACAAAAACAGGTTCAGACATTTTTGAAAGTATTGAAGTGAATGTTCCTAGAGACATGAAGGTTGCAGGAATGAATGTCAAACCATGA 1152 0.4097 MADICDKMSKGLRKIKPYLAMVSLQFGYAGMYIITMVSFKHGMSHWVLSVYRHVVATIFMAPFALVLERKIRPKMTLPIFLRLAVLGFLEPVLDQNLYNLGMKNTSTTFASATVNILPAITFIMAIIFRLETVNLKKIHSIAKVVGTVVTVSGAMVMTLYKGPAFQIIKGQSSSQHESGSTEPSEQNFVLGTIMLISSCGGWASFFILQSFTLKMYPAELSMTAWICFLGIFEGGIATLIFERDFSVWSLGFDSRLLACVYSGIVCSGMAYYVQGVVTRERGPVFVTSFSPLCMIITAALGSIVLAEQTHLGSIIGAIIIVCGLYTVVWGKSKDSVNNTINAPKSEGQELPIKDGTKTGSDIFESIEVNVPRDMKVAGMNVKP* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5046 383 PANTHER WAT1-RELATED PROTEIN 12 357 IPR030184 GO:0016021|GO:0022857
Mal1g5046 383 Pfam EamA-like transporter family 29 151 IPR000620 GO:0016020|GO:0016021
Mal1g5046 383 Pfam EamA-like transporter family 190 328 IPR000620 GO:0016020|GO:0016021
Mal1g5046 383 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 152 - -
Mal1g5046 383 PANTHER WAT1-RELATED PROTEIN 12 357 - -
Mal1g5046 383 SUPERFAMILY Multidrug resistance efflux transporter EmrE 247 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5046 Mal-Chr1 121424324 121429481 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5046 12 362 Nodulin-like Gene Family AT1G44800 64.023 3.96e-168 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5046 - - gmx:100814921 627.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g5046 1 121424324 121429481 Mal1g5046 1 121424324 121429481 ECH