Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5022 ATGAATACTTCTTATTATGTTATGGGATTGTTGTTGTTGATGGTTTACTTTGTTATTGGAACAACAACAACTGCTACGGTAATCAACTGTCCAGAAGATTTATCATGTGGAAATCAAGTTATCAAATTCCCTTTTCAAATCAAAAATCAGAATCCAAATTCATCTTTGTGTGACTACCCAGCTGGCTTTGAGTTATTTTGTTCATCAAATAATGAAACAATGATTGAACTTCCTCACAAAGTGAAACTCAATGTTAAGAACATTGACTACAAACACCAAACTATTCAACTATCCGATCCACAAGGTTGCCTTGACAAACACATCAACAACCTCAATCTTTCAGAATCTCACTTCAACTACTTGAAACGTGACTATGATGATGATTTTGTTGACTATCACTTTTTCTATTGTTCACTTTTGATTAGAGATGCCATAGGTTCTTATTTGGTTCATTGTCTAAGTACATCAACCTCTCAAACATATGTTATACCTTCTAGTACAATTATTGATGACCTTCCTCTTTCGTTTTGCACCAAAATGTATAATGTTTCATTCAATCCTTCTGATTCTGTTCGTTTGACTTGGTCTGAGCCTAATTGTAAACACTGA 609 0.3366 MNTSYYVMGLLLLMVYFVIGTTTTATVINCPEDLSCGNQVIKFPFQIKNQNPNSSLCDYPAGFELFCSSNNETMIELPHKVKLNVKNIDYKHQTIQLSDPQGCLDKHINNLNLSESHFNYLKRDYDDDFVDYHFFYCSLLIRDAIGSYLVHCLSTSTSQTYVIPSSTIIDDLPLSFCTKMYNVSFNPSDSVRLTWSEPNCKH* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5022 202 PANTHER RING-H2 FINGER PROTEIN ATL21A-RELATED 4 201 - -
Mal1g5022 202 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 4 201 - -
Mal1g5022 202 Pfam Wall-associated receptor kinase galacturonan-binding 30 99 IPR025287 GO:0030247
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5022 Mal-Chr1 120917437 120918045 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5022 34 201 C3H Transcription Factor Family AT2G25410 30.220 8.72e-16 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5022 - - mtr:MTR_1g031540 280.026