Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5021 ATGCCATCCTTAGCTCTTGTTGTGGTGTTTCTAATACTGATATTCTCCTACAATGCAGATGGTGATGAACATCAAGAATCATGTTCTAGAAGGTGTGGTGTCCATAACATCAGCCACCCTTTCCGATTGAAAGGCAGTCCCAAACATTGTGGTGACCAAAGGTATATCCTATCATGTGAGGACAACAACCAATTGATGTTGTACTATGAAAATGAAGAATACTATGGAAAATACTATGTACAATCAATCAATTACGAAAACTATACCACACGACTATTGGATTCCAATCTTAGTTACTATAATACTTCCACTTCCCTCCCTCCCTATTATACTTTAGGATTCTACAATTTGAGTTTTTATTTGTCCTCTCCCTACCTAACCTTTCATCTATACGAAAACTACAGTACTAGTCATATGTTGATGAAATCTATGTTATATGTGAGCTGTCCAAATCGGATGGAACTCCATACTCACAGGATGGAAATCTATGGTAATTGTATGAATAGAACTTCATACTCACAAGATGTGAATTCCTTCTATGTTGGTGGTCAAGGCAAATCTATGTTGGAATTTGGGTTGGAAGACAGGTGTCGTATAGAGTTTATGTATCTTACATCTTTGAATTTAGAAGATGGCAACAACAACATCAACAACAACATTTCTTGCACGGACTTCCGTCGTGAGATGTTTTATGGATTTGAACTTTCTTGGCTCAATAGTCGGTGTAAACACGGTCAGTATGCAATGTTCGATGACAATAACCAGCTTCACTGTAATTATGATTACTGGGAATATGCGGAATCGGTAGTTGATCTATTATGGGATACAATATATAAATTGGTTGGTTTGATTAGCAGTGTTAAATTCGTTCTTGGAGCGCCATTTATCATTGTATTATTAATCTACAAATGGCGACGGAAACATTTATCTATGTATGACGGCATCGAAGATTTTCTACGTAGTGACAATAGCATCATCCCTGTTAGGTACTCTTACAAAGACATACAAAGAATAACTGAACATTTCAAGACAAAACTTGGTAATGGAGGTTATGGGTCTGTTTTCAAAGGACAACTTCGAAGTGGTCGTCTTGTAGCGGTCAAGTTATTGGACAACACCAAGTCCAACGGTCAAGATTTCGTCAAGGAAGTTACAACCATTGGTAGGATTCACCATGTTAATGTGGTACAACTCATTGGTTTTTGTGTGGAAGGTTCAAAACGTGTTCTGATATATGAATTCATGCCAAATGGATCCCTCGAAAAATACATATTTTCTCATACCGAAGAGAATTATTCCTTGAGTTGCGAACAATTGTATTCCATTTCTCTTGGAGTGGCTCGAGGCATTGAGTACTTGCATAACGGATGTAATATGAAAATTCTACACTTTGACATAAAGCCTCATAACATCCTTCTTGATGAAAATTTCAATCCAAAAGTTTCTGATTTCGGACTAGCTAGACTTTCTCCTACAGATAAAAGCATTGTGTCATTAACTGCAGCAAGAGGAACCATTGGATACATGGCACCTGAACTATTCTATAGAAATGTCGGCACAATATCTTACAAAGTTGATGTCTATAGCTTTGGGATGTTGTTAATGGAGATGGCAAGTAGAAGGAGGAACTTGAATGCATTGGCTGAGAAATCTAGCCAAATTTATTTTCCTTTTTGGGTTTATGATCAGTTACATGATGGAAGTGAAGTAACAATTGAGAATGACACAAATGAGGAAGTGAAATTGGCAAAGAAAATGATGATTCTGGCTTTATGGTGTATACAGACAAAACCCGATGACCGTCCTTCAATGGATAAAGTGTTGGAGATGCTTGAAGAAGAAGATGGGGACTTGCAAATTCCTAATAAGCCTTACTTTTGTCCACAAGATCCACCAATAGCAGATGTTGAAGATGATAATGGTAGCATCTCATGGACTTCCTATTGTACATCAGTTAGTGATCCCAAGGGACCAACCTGA 1980 0.3753 MPSLALVVVFLILIFSYNADGDEHQESCSRRCGVHNISHPFRLKGSPKHCGDQRYILSCEDNNQLMLYYENEEYYGKYYVQSINYENYTTRLLDSNLSYYNTSTSLPPYYTLGFYNLSFYLSSPYLTFHLYENYSTSHMLMKSMLYVSCPNRMELHTHRMEIYGNCMNRTSYSQDVNSFYVGGQGKSMLEFGLEDRCRIEFMYLTSLNLEDGNNNINNNISCTDFRREMFYGFELSWLNSRCKHGQYAMFDDNNQLHCNYDYWEYAESVVDLLWDTIYKLVGLISSVKFVLGAPFIIVLLIYKWRRKHLSMYDGIEDFLRSDNSIIPVRYSYKDIQRITEHFKTKLGNGGYGSVFKGQLRSGRLVAVKLLDNTKSNGQDFVKEVTTIGRIHHVNVVQLIGFCVEGSKRVLIYEFMPNGSLEKYIFSHTEENYSLSCEQLYSISLGVARGIEYLHNGCNMKILHFDIKPHNILLDENFNPKVSDFGLARLSPTDKSIVSLTAARGTIGYMAPELFYRNVGTISYKVDVYSFGMLLMEMASRRRNLNALAEKSSQIYFPFWVYDQLHDGSEVTIENDTNEEVKLAKKMMILALWCIQTKPDDRPSMDKVLEMLEEEDGDLQIPNKPYFCPQDPPIADVEDDNGSISWTSYCTSVSDPKGPT* 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5021 659 Pfam Protein kinase domain 342 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g5021 659 ProSiteProfiles Protein kinase domain profile. 340 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g5021 659 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 5 244 - -
Mal1g5021 659 PANTHER RUST RESISTANCE KINASE LR10-RELATED 283 632 IPR045874 GO:0004672
Mal1g5021 659 CDD STKc_IRAK 346 613 - -
Mal1g5021 659 SMART serkin_6 340 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g5021 659 PANTHER RUST RESISTANCE KINASE LR10-RELATED 5 244 IPR045874 GO:0004672
Mal1g5021 659 ProSitePatterns Serine/Threonine protein kinases active-site signature. 461 473 IPR008271 GO:0004672|GO:0006468
Mal1g5021 659 Pfam Wall-associated receptor kinase galacturonan-binding 28 94 IPR025287 GO:0030247
Mal1g5021 659 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 283 632 - -
Mal1g5021 659 SUPERFAMILY Protein kinase-like (PK-like) 322 612 IPR011009 -
Mal1g5021 659 Gene3D Transferase(Phosphotransferase) domain 1 415 620 - -
Mal1g5021 659 ProSitePatterns Protein kinases ATP-binding region signature. 346 368 IPR017441 GO:0005524
Mal1g5021 659 Gene3D Phosphorylase Kinase; domain 1 320 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5021 Mal-Chr1 120908777 120912291 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5021 329 644 Receptor kinase-like Gene Family AT5G38280 47.352 1.69e-97 312
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mal1g5021 Pkinase 2.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5021 - - aip:107605930 704.131
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g5021 1 120908777 120912291 Mal1g5021 1 120908777 120912291 ECH