Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5020 ATGAACACTTATTATCATGTTACGGCATTGTTGTTGTTGTTGTTGGTGGTGCTGGAGTTTGCACCTGGAACAACAACAGCTACTTCAATTAACTGTCCAGAAGATGTAACATCATGTGGAAATCAAGTTATCAAGTTCCCTTTTCAAATCAAAAATCAGAATCCAAATTCATCTTTGTGTGACTACCCAGCTGGCTTTGAGTTATTTTGTTCATCAAATAATGAAACAATGATTGAACTTCCTCACAAAGTGAAACTCAATGTTAAGAACATTGACTACAAACACCAAACTATTCAACTATACGACCCACAAAGTTGCCTTGACAAACACATCAACAACCTCAATCTTTCAGAATCTCACTTCAACTACTTTGATGAATTTGACTATGTTGATAATTATTACTTCAATTGTTCAGTTTTGATTAGAGATAGGATAGATAGATATTTGGTTCCATGTCTAAGCACTTCAACCTCTCTAATATACGCTATCCCCCCTTATGATTCAATTGACGTCCTTCCTCTTTCATTTTGCACCAAAATGTTTAACGTTTCATACAACTCTGTTGATTTTGATCCACAGATAAACTTTCTTCGTTTAATGTGGTCTGAGCCTAATTGTAAACACTGTGAATCAAAAGAAAAAATATGTGGCTGGAAGAATACTACTAGTACCAACAAGGAAGTAGATTGTTTTGCCAAAAACAAGAAAGGTTCATCAACGGCTCTAGTCAACACAGGATCAATTCTAGGATCGTTGTTTTTTATCTTGTTGATTGGTGGAGTCTACCATATTTATGACTCTTACATACTAAAGAAAGAAAAACAAGCAATTATAGAAAAGTTTTTAGAAGATTATAGAGCTCTTAAGCCCACTAGATACTCTTATGTAGAAATTAAGAGAATCACAAATAATTTTGGAGATATGATAGGACAAGGAGCCTATGGTATTGTGTATAAAGGAAACATTTCAAAAGAATTCATTGTTGCTGTGAAGATACTAAATGTTTCTCAAGGAGATGGTCAAGACTTCTTAAATGAAGTTGGTACAATGGGTAGAATACACCATGTTAATATTGTTCGATTGATCGGTTTTTGCGCCGATGGCTTTAGAAGAGCTCTTATTTATGAGTTTTTGCCCAATGGTTCTCTGCAAAAGTTCATAAATTCACCGGACAACAAGAAAAACTTCCTTGGGTGGAAAAAGTTGCACGAAATTGCTTTAGGAATAGCTAAAGGAATTGAATATCTTCATCAAGGTTGTGATCAACGCATCCTCCATTTTGATATCAAGCCACAAAATGTGTTACTTGACCATAACTTTATTCCAAAAATATGTGACTTTGGTCTAGCTAAATTGTGTTCAAGGGATCAAAGCATAGTGTCAATGACCGCAGCTAGAGGAACTTTGGGTTACATTGCTCCGGAAGTTTTCTCAAGGAACTTTGGAAATGTGTCTTACAAATCAGATATTTATAGTTATGGAATGATGTTGCTTGAAACAATAGGAGGGAAGAAGATCACAGAGGATTTAGAGGAAAACAGTAGTCATGTTTACTATCCGGAATGGATTTATAATCTTATAGATGATCAGGAAGAAATGAGAATTCATGTTGATGATGAAGGGGATGAAAAAATTGCAAGGAAACTGGCCATTGTGGGACTTTGGTGCATACAGTGGCATGCTATGGATCGACCATCAATGCAAATGGTGGTTCAGATGTTGGAAGGAGATGTAGACAAAACTCCAATACCTCCAAATCCTTTTGCTTCTCAATCAAGACAACCTAGGAGAAATGGTGGAGTTACAACTACAAGACAACTAACTCAAGAGTTAGATGTAATTCAAGAGTTAGATTGA 1857 0.356 MNTYYHVTALLLLLLVVLEFAPGTTTATSINCPEDVTSCGNQVIKFPFQIKNQNPNSSLCDYPAGFELFCSSNNETMIELPHKVKLNVKNIDYKHQTIQLYDPQSCLDKHINNLNLSESHFNYFDEFDYVDNYYFNCSVLIRDRIDRYLVPCLSTSTSLIYAIPPYDSIDVLPLSFCTKMFNVSYNSVDFDPQINFLRLMWSEPNCKHCESKEKICGWKNTTSTNKEVDCFAKNKKGSSTALVNTGSILGSLFFILLIGGVYHIYDSYILKKEKQAIIEKFLEDYRALKPTRYSYVEIKRITNNFGDMIGQGAYGIVYKGNISKEFIVAVKILNVSQGDGQDFLNEVGTMGRIHHVNIVRLIGFCADGFRRALIYEFLPNGSLQKFINSPDNKKNFLGWKKLHEIALGIAKGIEYLHQGCDQRILHFDIKPQNVLLDHNFIPKICDFGLAKLCSRDQSIVSMTAARGTLGYIAPEVFSRNFGNVSYKSDIYSYGMMLLETIGGKKITEDLEENSSHVYYPEWIYNLIDDQEEMRIHVDDEGDEKIARKLAIVGLWCIQWHAMDRPSMQMVVQMLEGDVDKTPIPPNPFASQSRQPRRNGGVTTTRQLTQELDVIQELD* 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5020 618 Gene3D Phosphorylase Kinase; domain 1 278 377 - -
Mal1g5020 618 SUPERFAMILY Protein kinase-like (PK-like) 287 575 IPR011009 -
Mal1g5020 618 Pfam Wall-associated receptor kinase galacturonan-binding 32 102 IPR025287 GO:0030247
Mal1g5020 618 ProSiteProfiles Protein kinase domain profile. 303 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g5020 618 PANTHER RUST RESISTANCE KINASE LR10-RELATED 28 617 IPR045874 GO:0004672
Mal1g5020 618 MobiDBLite consensus disorder prediction 585 605 - -
Mal1g5020 618 Gene3D Transferase(Phosphotransferase) domain 1 378 581 - -
Mal1g5020 618 SMART serkin_6 303 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g5020 618 MobiDBLite consensus disorder prediction 581 605 - -
Mal1g5020 618 ProSitePatterns Serine/Threonine protein kinases active-site signature. 424 436 IPR008271 GO:0004672|GO:0006468
Mal1g5020 618 Pfam Protein kinase domain 307 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g5020 618 ProSitePatterns Protein kinases ATP-binding region signature. 309 331 IPR017441 GO:0005524
Mal1g5020 618 PANTHER RECEPTOR-LIKE KINASE 28 617 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5020 Mal-Chr1 120891038 120893552 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5020 38 591 Receptor kinase-like Gene Family AT1G66910 36.721 1.67e-111 347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mal1g5020 Pkinase 5.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5020 - - mtr:MTR_1g031540 997.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g5020 1 120891038 120893552 Mal1g5020 1 120891038 120893552 ECH