Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5019 ATGTCATCCTTAACCCTTGTTGTGATGTTACTAATACTGATATTCTCTTACAATGCAAATGGTGATGAAGAAGAGTTGTGTTCTAAAAGGTGTGGTGTCCATAACATCAGCCACCCTTTCCGATTGAAAGACAGTCCCAAACACTGTGGTGACAAAAGGTACATCTTATCATGTGAGGACAACAACCAATTGATTTTGTACTATGAATATGAAGAATACTATGGAAAATACTATGTACAATCAATTAATTACAACAACTTCACCATACGACTATTGGATTTCAATCTTCATTCTAATAATTCCCTCCCTCCTTACTATTCTTTAGGACTCTATAATTTCAGTTCTTCCATCACTTCACCCTACCTAGCCTTTCATCGATACAAAAACTACACTAATGATCATATGTTGATGAAATCAATGTTATATGTCAACTGTCCAAATCGGATGGAATACTCATACATTGGTAATTGTATGAATAGAACTTCATACTCACAAGATGTGAATTCTTTCTATGTTGGTGGCTATGGCAAATCTCTGTCGGAATTTGGGCTGGGAGACGGGTGTCGTATAGAGTTTATATATCTTATATCTTTGAATTTTGAATATAGCAGCAACAACAACAACAACAACATTTCTTGCGTGGACATCCGTCGTGAGATGTTTTATGGATTTGAACTTTCTTGGCTCAATAGTCGGTGTAAACATGGTCGATATGTGGAGTTCGATCAAAATAATCAGCCTCAGTGTATATATGATTACTGGAGTAATGTGGCTTGGATAGTTAAACGTTTATCGATTCACATAGGTTCTTTGGTTGGTTTGCTTATTGGTTTTAAATTTGTTCTTGGAGCGCCATTTATCATTGTATTATTAATCTACAAATGGCGACGGAAACATCTATCTATGTATGATGGCATCGAAGATTTTCTACGTAGTGACAATAGCATCATGCCTATTAGGTACTCTTACAAAGACATAAAAAGGATAACTGAACAATTCAAGACAAAACTAGGCAATGGAGGGTATGGATCCGTTTTCAAAGGACAACTTCGAAGTGGTCGACTTGTAGCAGTCAAATTATTGGACAGAGCCAAGTCCAACGATCAAGATTTTGTCAATGAAATTGCTACCATTGGTAGGATTCACCATGTTAATGTGGTACAACTCATTGGTTTTTGCGCGGAAGGTTCAAAACGTGTTCTGATATATGAATTCATGTCAAATGGATCACTCGAAAAATACATATTTTCTCATACCGAAGAGAATTATTCCTTGAGTTGCGAACAATTGTATTCAATTTCTCTTGGAGTGGCTCGAGGCATTGAGTACTTGCATAACGGATGTAATATGAAAATTCTACACTTTGACATAAAGCCTCATAACATCCTTCTTGACGAAAATTTCAATCCAAAAGTTTCTGATTTCGGACTAGCTAGGCTTTCTCCTACAGATAAAAGCATTGTATCATTAACTGCAGCAAGAGGAACCATTGGATACATGGCCCCGGAACTATTCTACAGAAATGTTGGCACAATATCTTACAAAGCTGATGTCTATAGCTTTGGGATGTTGTTAATGGAGATGGCAAATAGAAAGAAAAACTCGAATGCATTGGCTGAGCAATCTAGCCAGACTTATTTCCCTTTTTGGGTTTATGATCAATTACAAGATGGAAGAGAAATAACAATTGAGAGTGACACAAATCAAGAGATGAAATTGGCAAAGAAAATGATGATTGTGGCTTTGTGGTGTATACAGGCAAAACCTAGCTATCGTCCTCCAATGGATAAAGTGTTGGAGATGCTTGAAGAAGAAGATGAAGATTTGCAAATGCCTAATAAGCCTGACTTTTATGCACAAGATGAGGATACTAGAGATGATAGGACTGGTAGTTCATGGTATTCCTCTGATACATCAGTAACTGATTCCAAGAAACCAATTTGTTCTCATTTTGGTTAA 1959 0.366 MSSLTLVVMLLILIFSYNANGDEEELCSKRCGVHNISHPFRLKDSPKHCGDKRYILSCEDNNQLILYYEYEEYYGKYYVQSINYNNFTIRLLDFNLHSNNSLPPYYSLGLYNFSSSITSPYLAFHRYKNYTNDHMLMKSMLYVNCPNRMEYSYIGNCMNRTSYSQDVNSFYVGGYGKSLSEFGLGDGCRIEFIYLISLNFEYSSNNNNNNISCVDIRREMFYGFELSWLNSRCKHGRYVEFDQNNQPQCIYDYWSNVAWIVKRLSIHIGSLVGLLIGFKFVLGAPFIIVLLIYKWRRKHLSMYDGIEDFLRSDNSIMPIRYSYKDIKRITEQFKTKLGNGGYGSVFKGQLRSGRLVAVKLLDRAKSNDQDFVNEIATIGRIHHVNVVQLIGFCAEGSKRVLIYEFMSNGSLEKYIFSHTEENYSLSCEQLYSISLGVARGIEYLHNGCNMKILHFDIKPHNILLDENFNPKVSDFGLARLSPTDKSIVSLTAARGTIGYMAPELFYRNVGTISYKADVYSFGMLLMEMANRKKNSNALAEQSSQTYFPFWVYDQLQDGREITIESDTNQEMKLAKKMMIVALWCIQAKPSYRPPMDKVLEMLEEEDEDLQMPNKPDFYAQDEDTRDDRTGSSWYSSDTSVTDSKKPICSHFG* 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5019 652 MobiDBLite consensus disorder prediction 605 652 - -
Mal1g5019 652 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 6 235 - -
Mal1g5019 652 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 271 629 - -
Mal1g5019 652 ProSiteProfiles Protein kinase domain profile. 331 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g5019 652 ProSitePatterns Serine/Threonine protein kinases active-site signature. 452 464 IPR008271 GO:0004672|GO:0006468
Mal1g5019 652 MobiDBLite consensus disorder prediction 631 645 - -
Mal1g5019 652 Pfam Wall-associated receptor kinase galacturonan-binding 27 93 IPR025287 GO:0030247
Mal1g5019 652 ProSitePatterns Protein kinases ATP-binding region signature. 337 359 IPR017441 GO:0005524
Mal1g5019 652 Gene3D Transferase(Phosphotransferase) domain 1 406 616 - -
Mal1g5019 652 PANTHER RUST RESISTANCE KINASE LR10-RELATED 6 235 IPR045874 GO:0004672
Mal1g5019 652 PANTHER RUST RESISTANCE KINASE LR10-RELATED 271 629 IPR045874 GO:0004672
Mal1g5019 652 SUPERFAMILY Protein kinase-like (PK-like) 312 603 IPR011009 -
Mal1g5019 652 Gene3D Phosphorylase Kinase; domain 1 310 405 - -
Mal1g5019 652 SMART serkin_6 331 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g5019 652 Pfam Protein kinase domain 334 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5019 Mal-Chr1 120884723 120887731 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5019 3 622 Receptor kinase-like Gene Family AT5G38260 35.047 1.46e-102 324
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mal1g5019 Pkinase 4.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5019 - - aip:107605930 701.434