Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5009 ATGGATAATAATAATAATAATATTCTTGGTCTTCTGAAACTTCGTATTAAAAGAGGTATTAATCTTGCAATTCGTGATTCTAATTCCAGCGACCCTTATGTTGTTGTCAACATAGGCCATGAACAGAAGTTGAAGACTCGTGTGGTGAAAAACAATTGCAACCCTGAGTGGAATGAAGAATTAACCCTTTCAATAAGGGATGTAAGAACTCCAATACATCTGACGGTTTTTGACAAAGACACTTTCTCCGTAGATGACAAAATGGGTGATGCAGATGTAGACTTGAAACCATATGCTCAAAGTGTACAAATGAGATTGGACACTCTTCCAAATGGTTGTGCAATCAAGAGGGTTCAAGCAAATAGGACTAACTGCCTTGCTGAAGAGAGCAGTTGTATTTGGAAAAATGGAAAAGTCATCCAAGAAATGATTCTAAGATTGAGAAATGTTGAGAGTGGAGAATTGGTTGTGGAAATTGAATGGGTTGATGTTCCAGGTTGCAGAGGTCTATTAGGGGCACAACTTTAA 528 0.3769 MDNNNNNILGLLKLRIKRGINLAIRDSNSSDPYVVVNIGHEQKLKTRVVKNNCNPEWNEELTLSIRDVRTPIHLTVFDKDTFSVDDKMGDADVDLKPYAQSVQMRLDTLPNGCAIKRVQANRTNCLAEESSCIWKNGKVIQEMILRLRNVESGELVVEIEWVDVPGCRGLLGAQL* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5009 175 Pfam C2 domain 11 101 IPR000008 -
Mal1g5009 175 SMART C2_3c 11 107 IPR000008 -
Mal1g5009 175 Gene3D C2 domain 5 167 IPR035892 -
Mal1g5009 175 CDD C2_ArfGAP 9 153 - -
Mal1g5009 175 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 8 96 IPR035892 -
Mal1g5009 175 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 10 7 168 - -
Mal1g5009 175 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 7 168 IPR044562 -
Mal1g5009 175 ProSiteProfiles C2 domain profile. 1 109 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5009 Mal-Chr1 120699432 120701627 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5009 43 170 C2H2 Transcription Factor Family AT1G70790 67.692 9.26e-63 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5009 - - gmx:100788395 278.87