Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5001 ATGTTGGCAGCATGCAGAATCCCAATCCTAACACCGTCCTCTTCCTCCAACCTCAATCCTTGTCATTTTGTCACCTCAATCACCACCACCAGAGTCACACTCCCATTCACTTCATCTTCCAAACTCCCTCTTCTTCTCAGGCTCACTCGTATTAATAGTACTAGTAGTAGTAGTAATGTTCCCCCTGATCCTGCCGTTGATCCTTCCTCTCCCGGAATTGATGAAGCAGAAAGTGAATCATCTTCTGACTTTGGTGATAGCTATGTGGCCTTGTTTGTTCGTATGCTAGGCCTAGATCACGATCCTCTTGATAGAGAACAAGCTATAGTTACTCTTTGGCAATATTCACTTGGTGGAAAGAAGTCTATTGACAATATAATGCAATTTCCTGGTTGTATTAATCTTGTTGTGAACCTCCTTAGATCGGAGTCTAGTCCGTCATGTGAGGCAGCTGCAGGCCTTCTGCGATCACTGTCTTCAATCGACATATATAGGAACTCGGTAGCAGATAGTGGAGCTATAGAAGAGATCAATAGATTGCTGACACAATCTTCCTTGGCTCCCAAGGTAAAGATGCAGAGTATGAATACACTGTGGAATTTATCTGTTGATGAGAAGCTCCGCGTTAAACTTGCAAAGAGTGGTATTCTTTTGTTAGCTACTAAGTACCTTGATGATGAGGATATGGAAGTAAAGGAAGCTGCAGCAGGTGTTTTGGCAAATTTAGCATTGACCCGTGTTAACCACGAAATCATGATTGAGGCGGGTGTTATTCAGAAATTGGCAAAGTTCTTAATGCTTGACTCTGAAGGATCTCGAGTCATTAGAAAGGAAGCAAGGAATGCATTGCTAGAACTTGTGAAGGACAATTATTACAGAATTCTTGTTATTGAGGAGGGTTTAGTTCCTGTGCCATTAATAGGTGCTGCAGCCTATAAGTCATACAACCCACGTTTATATGAGGCGCCTGCATTTCCAGATGGCACAGAAATCAAAATGACTTATAACAAACCTTCTAGATTTGGCGCATCAGAAGTACTTCTTGGATTGAATGTTGATAATAATGATAACATAGATGAAGCAAAAGCCAATGCAATTATTGGACGGTCACAACAGCAATTCCTTGTTCGTGTTGGGGCTATAGAAATGGGAGAAGCGGCACTTCATTCTGAATGCTCAGATGATCTGCCACGTCTCACACTTCTACATTGGATTGATGGTGTTGCTCGTTTGGCACTGATACTAGAATTAGAAGATAAGTCAGCAATAGTAAGAGCTGCAGAGTCAATTGCTAGTGCATGTATAAATGAACATATGCGTATTGCATTCAAGGAGGCTGGTGCAGTTAAGCACTTAGTACGGCTTTTGTCTTGCAATGATAATGCAGTCCAGCTTGCAGCGACTCAAGCTTTGGAAAAGCTGTCTGCTAGCAATTTTGTTTGCCGAGTAATTGAAACTGAGGGTGGTTTAGCTCCTTTAGTTAGTATTTTAAATTGCTCAGACGTAGCTGGAGCTATTGCGGGAAAGTCGCTGAACGTACTTGCTCAGATATTAGATCCCAATAAAGAGATGCAATTGAAGTTTTATGATGGACCAGTAAATGAATCTAAGAAGGCATTTGGTGGAGCCAAAAATGATGGTTCAAAGGAATCAAGTAATACTGAGCAAGCCGTATCGAAAACAAACCCAAGGAGCGATATACTGAACTCAGTTTTCACTGCACGCCTTGTGGAGATTTTGAATACCACTTCACCCAGTTTACAAGAAAAGGCCGCATCTGTTCTCGAGTTTGTGGCATTGACTGACCCAACACTGAGTCCGATTATTTCTGTGGATATTGAAAATGGTCTCAATTCTACTTTTCAGCAAAATCTCTTGAAAATTTCGGCAGAGACAGAATCTGATGTGGAAGATCAGTTTCCAGCAGCATATGCTCTTGAACTTGAAGAGGCTGGTCTTGCAATATCTGCAGCATCCCGGTTACTGACAAGACTACTTGACTCTAAGCAGTTTTGTGACAAAATAAATCTCTCCCATTTCGTTGACACTCTCCGCAAAATTCTCAAGTCACATATTCCCCTCCGCAGCAAAGACTGGGTAGCTGCTTGCCTAGTTAAACTAAGTTCTCTCTCTGGTTACTACACACGTTCTAATCCGGTCAATGTAGAAGTTACACTTTATGACACAATTCCGAGACTTGTGGAACAGATCAAAACTTCATTCTCTTTAGAAGCACAGGAAAAGGCTGCTGTAGAACTTAATAGAATAGTATCTGAAGGGGTGGTAGATTCCACAGGAGCTATTATTTCGGAAGGGGCTGTGTATCCTTTGGTGAAGCTGATTGAAGAAGGTAGTGAAAGAGGAACCGAAGCAAGCTTGAAAATACTGTATAATCTGAGTATGGACAGTGAGAACCATTCAGCACTTCTTGCTGCTGGAGCAGTCCCAGCCTTAAGAAGAATTGTTCTGTCAGAAAAACCACAGTGGCAAAGGGCACTTCATTTGCTCAGGAGTTTGCAAACATGA 2526 0.4192 MLAACRIPILTPSSSSNLNPCHFVTSITTTRVTLPFTSSSKLPLLLRLTRINSTSSSSNVPPDPAVDPSSPGIDEAESESSSDFGDSYVALFVRMLGLDHDPLDREQAIVTLWQYSLGGKKSIDNIMQFPGCINLVVNLLRSESSPSCEAAAGLLRSLSSIDIYRNSVADSGAIEEINRLLTQSSLAPKVKMQSMNTLWNLSVDEKLRVKLAKSGILLLATKYLDDEDMEVKEAAAGVLANLALTRVNHEIMIEAGVIQKLAKFLMLDSEGSRVIRKEARNALLELVKDNYYRILVIEEGLVPVPLIGAAAYKSYNPRLYEAPAFPDGTEIKMTYNKPSRFGASEVLLGLNVDNNDNIDEAKANAIIGRSQQQFLVRVGAIEMGEAALHSECSDDLPRLTLLHWIDGVARLALILELEDKSAIVRAAESIASACINEHMRIAFKEAGAVKHLVRLLSCNDNAVQLAATQALEKLSASNFVCRVIETEGGLAPLVSILNCSDVAGAIAGKSLNVLAQILDPNKEMQLKFYDGPVNESKKAFGGAKNDGSKESSNTEQAVSKTNPRSDILNSVFTARLVEILNTTSPSLQEKAASVLEFVALTDPTLSPIISVDIENGLNSTFQQNLLKISAETESDVEDQFPAAYALELEEAGLAISAASRLLTRLLDSKQFCDKINLSHFVDTLRKILKSHIPLRSKDWVAACLVKLSSLSGYYTRSNPVNVEVTLYDTIPRLVEQIKTSFSLEAQEKAAVELNRIVSEGVVDSTGAIISEGAVYPLVKLIEEGSERGTEASLKILYNLSMDSENHSALLAAGAVPALRRIVLSEKPQWQRALHLLRSLQT* 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5001 841 MobiDBLite consensus disorder prediction 53 82 - -
Mal1g5001 841 SUPERFAMILY ARM repeat 411 830 IPR016024 -
Mal1g5001 841 MobiDBLite consensus disorder prediction 546 562 - -
Mal1g5001 841 Pfam Armadillo/beta-catenin-like repeat 436 475 IPR000225 GO:0005515
Mal1g5001 841 SMART arm_5 204 244 IPR000225 GO:0005515
Mal1g5001 841 SMART arm_5 761 801 IPR000225 GO:0005515
Mal1g5001 841 SMART arm_5 560 600 IPR000225 GO:0005515
Mal1g5001 841 SMART arm_5 161 203 IPR000225 GO:0005515
Mal1g5001 841 SMART arm_5 120 160 IPR000225 GO:0005515
Mal1g5001 841 SMART arm_5 436 476 IPR000225 GO:0005515
Mal1g5001 841 SMART arm_5 245 288 IPR000225 GO:0005515
Mal1g5001 841 SMART arm_5 802 841 IPR000225 GO:0005515
Mal1g5001 841 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 172 216 IPR000225 GO:0005515
Mal1g5001 841 SUPERFAMILY ARM repeat 89 517 IPR016024 -
Mal1g5001 841 Gene3D - 371 616 IPR011989 -
Mal1g5001 841 Gene3D - 630 841 IPR011989 -
Mal1g5001 841 MobiDBLite consensus disorder prediction 539 562 - -
Mal1g5001 841 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 52 841 - -
Mal1g5001 841 Gene3D - 82 322 IPR011989 -
Mal1g5001 841 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 215 257 IPR000225 GO:0005515
Mal1g5001 841 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 447 489 IPR000225 GO:0005515
Mal1g5001 841 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 772 814 IPR000225 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5001 120 321 U-box Gene Family AT2G23140 28.512 7.67e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g5001 - - lang:109360684 1096.26