Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g4996 ATGACATCAGTCCTTTCTGATTGCTTCAAAGTTATCGCGGAGAAATTTCTGGATCTGACAATAGGAGAAGCACGTTACCTATGTTGTTTCAAGACCATAGTGGAAGAGCATGAAAGGGAAAAGTGCAAGCTGAGAGCAAAAAGGAAAGGTGTACAAGAAAATGTGAATGTGGCAAAGAATAGAGCTGAGGAGATAGTGAATGATGTTACGGTTTGGATCCAAAATGCTGACAATATTATCGACGAAAACACTGAAACAAAAAGGACTTGTTTTTTCGGATGGTGTCCAAATTGTATGTGGCAATACCAAAGAGGCAAGAAACTAGCGTTAAAGACGTTGGAGATTGCAGAACTTAAGGGACTTAACTTTGAAAGTGTTGGCCGTGCCGGTAAGCTTCCAGGTGTGGAGTATCACTCTTCACAAGATTTTATTGAGTTTGAGAGCAGAAGCTCTCAACACAAACAGCTTTTGGATGCAATAAAAAATGACCAAAATTATATGGTTGGATTGCATGGTATGGGAGGGACTGGTAAGACAACATTGGTGCAAAAAGTCGGTAATGAAGTCAAAAGATCAAATCTATTTGATGAAGTCATCTTTACTACCGTGTCGCATGCCCCTGATATTAGAAAGATTCAAGATAACATTGCTGTCCCTTTAGGTTTGAAACTAGAGGAAGGAGACCAGTTGCAAAGGGCCAAAAAACTATGGTCTAGATTAACTAATGGTGAAAGGATACTTGTAATATTAGATGATGTTTGGGAGGAGCTCAAGTTTGAAGATATTGGTATCCCCTCTAGTAACAATCACAATGCTTGTAGAGTTTTGCTAACCTCACGAAAGATGAGTGTATGCAATTCAATGTGCTGCCAAAGCACGATTGAGCTAGAGCTTTTATCTGAGGAGGATGCAAAGATTCTGTTTGAAAAGCATACCGGATTAAGGGATGACTCATCCAAAAGTTTGAAAAAATTGGCGCAGCAAATTGCGAATGAATGTAAAAGATCACCTGTCGCGATTACAGCTATAGCAAAAAGTTTGAAGCACCAGCCTCCGGAACTTTGGAAGGCGGCTTTTAAAAGCTTGAAAGAATTTAAACAAATCCGCAATGTTGATGAAGATTTGAAGATCTATAAATGCTTTCAGGTAAGCTATGAAAATCTTAAGGATGAAAAGGCCAAGAAACTCTTCATGTTATGTTCTCTATTCCCCGAAGATTATGAAATTCCTGTGGAAGATTTAACCAGATTTGGGAAAGGATTAGGCATATTTGGAGACGTTGACTCATATGAAGCAGCAAGAATAGAAATGCTTACAGCAAAAAGGAAACTCCTAGATGCTTGTTTATTGTTGAAAGGTCGGGAGGGATGTGTCAAAATGCATGACCTGGTACGTGATGCGGCGCATTGGATAGAAAACTACAAGATTCAGGTGATTATGGGATGCAAAATTCATGCAACAGCAAAAAAAGGTACCATGACATATTTGTATTGCCACAATGTAAAAAGATTTTCCCCCTTTCTAGATCAGTTGGATTGCACCAAACTGAAGATTCTGATAATACTTTGCTTAGACAAAGAAGGTCTAGTGGAAATTCCACAAGCATTTTTTGAAGGAACAAAAGATCTAGAAGTTTTGGTTATATCCAAGGCAGAAAACATTAGGGGAAAGCCGAGTCTAGCTTTGCCACAATCAATCGAATCCTTGAAAAATATCCACACTCTATGCTTGAGAGGTTTTAATTTAGGTGATATCTCTATGCTGCTAAAACTAGAAATGCTCGAGACTCTTGAGTTGAGTGATTGCTCAATCATTAGACTTCCCAAAGGGATGGTGAAACTTGAGAAGTTGAGATTATTGAGTTTGACATGCTGTGTAATTGAAAAGAATCCATTTGAAGTGATTGGAAAACTTTCTCAATTAGAAGAATTGTACGTCATGCGAAGTCTGGACAGATTCAAATGGAAATTTGACAAAGAAGTTGTTGCCACCATTTTTGACAAATACAACATTATCCCGACATTGCAGAGGTACCATATACAGATAGGACATGATTTGGGATTATATCATTCAGTGGATGATTCCATATCAAGAGCTTTGTCTATTGAATATTTTGATCCCAATTCAAATGCAACAATTAAGGACCTGGTGGAAAGAGCAGAGATTCTTCATTTGAAGAGGATTCAAGGAGATTATACAACTGTAACGCCGCAACTAGTTGAAGCAATAGGAGGAGAAATGAATGACATGATCCATCTCAAGCTTGAGTTTTGTTCCAAGATAGAATGCCTCATTGATACTAATAACTTTTCATCTTCCATTGGAAGCATATTCTCTAAGTTGGTTAAGATAGAAGTTAGAGGCATGGATAATTTGAAAGAACTGTGCCATGGTCCACCTCCTTCTGACTTCTTTGGTAACATGCAAGAGATAAGTATACATTTATGTCACCAATTGCATGGAAGATTATTTGAAGGAAACTTGAATCTTGGTAGAATTAAGGTGTTTCAAGTCGAATATTGTCGCATGTTGACATCTATGTTCACGCCTTCCACAGCTGCAAGTCTTGTCCTATTGGAAGAACTGATAATAGAAGGTTGCAAGGAACTGAGAAACATAATATCGTATGAGGAGAAAGAAGAAAACATACAAGAGCATATAGTTCAGCGTGATGATGATAATGATCAAAAAGTTTATGGCTCAATTTTTCCCAAATTGAAAACTATTGACTTAAGAATGTGTGACCAATTAGAATTTATAATCACAGAATGTGTCACAAGCAGTCCTTCTGATCGCCTATCGAGTGAGGCGCTGACCCTGCACAATGCCAGAGAGATAAGACTCCAAAAATGTCACCTATTGAGACAGTCACTGATCCTGCGCCATGTCAGAGAGATAAGACTCAAAAACTGTTTAAAAATAAAAGTTCTGTTCAGTCTATCGGTTGCTCGAACAATGTTGTTGGAAGAATTGAGAATTAAGGAATGCCATTCATTGAAGAACATTATAACAGATGTTGGAGATGATCAGAATTGTGTGACGCGTGGCTCAGTCTTCCCAAGATTGAAATTCCTGAGTGTTCAGGATTGTAGCCAAATGGAATATCTGTTGGTACAAGACCATGAAGAACATAATAATAATGACACAAAGGTTCATATTGATCTCCCAGAATTGGAGCATTTAACTTTCTCTAGAGTACCAAAACTCATCAATACTTGCTCCATACACTATAATGCCACATATCCATCTTTGAAGGAGTTTTGTTTGGAAGGGTGTCCCGAGTTTACCATCAACTCTATTAGTGATTTCATGTTTCATTTGGGTGCAAGACAACTGGACGACACATCCACTGAGGACATAGGAGCAATCATGAAGCATTTGCAGACTCTAGAAAAGCTATGCATAGAGAACTCAGACATTCAAGGGATATTTTGTCTTGAAGAACATCCAATCATTGGTCAACAAATGAGCTCAAGTTTGCAATCCTTGAAATTGAACAATCTACATGATCTAAGGTATACATTCATGGGTCCAAAAAGTTTTATGATCCTCCAAAATGTCAAAACTTTAGAAATTGAGGGATGTAGTAAACTCAAAGTTATCTTCTCAGCATCTGTCTTGAGAAGCCTACCACAACTTACATATCTAGAAATCAACAACTGTGAAGGATTACGTAAAATAATGGAAGACAATGAGGAAAATCAAAGGCATACAATTCCTCAATCTCAACTGATATGTTTTCCGAAGCTTGTTGCACTTGTCATCAAGAGTTGCCACAGTTTGAAAAGTCTCATCTCTGTAACCACATTCCAAGAGTTTCCAAAGTTAGAGCTCATGATCATAAAAGAAGCCTCTCAGTTAGATGACATGTTTGTAAGGGAACGATGTGATGAGATTCCTCAGCAGAAACTTCGGCTTCCTAAACTCAAATATCTAGTGCTTATGCAACTGCCGAACCTCACTGATCCGAGCCAACATATGGAGTTGCAGAATGTGACTTACAGCATTTTGGATCATTGCCCTAAACTTTCATTTGATTCAACAACTACTCTTGAGGACTTAAAAAATATATTAGAAGATGGTAATATTGATCGCGATGTTCACTGGGAGTTATTTGAAATTTTTGACACTATAGTGGAAGAGGCTGAAAATGATAATCCATTGTCGGAAACCACTCATCAATTACCGATAGTACAGGAAGTTCAAGATGTGCAGGTTCAATCAACGCCTCAAAGGGAGCTTCCTTGTTCACAGATTATTGATGAAGCAGATAAAGAAATTGTTGCTGTACATGATTCAAGAATGGAAACTTCATCAACAGATTCAGAAGTGATAACCTTAACAATACCTTGTCCAATTCCTTCAGATATCCAGCAATGTGAAACAACACAAAATACTGATGAAACAGTGGAACAAAGTCTTTCGGAGTGTCCTGAGGCAGAGAAAGCTAGTACAAAAATATGGTCAACAAACTCAGAAGCAAGGAACCCATCTCCAAGACCATTACATATTCCTTTACAAAAAGCATCTTCACAGAGTTTTATTAATGGAAAAGTTGAAGAAGTTTCAACTTCAGATGAAACTAAGACATCACCAAAGTTGATTGAAAAACAATCAATAGATGAACAAATTCCTATGGAACAAGGAATAATAAGAGAAAATAAGAGCTTCAATGGAACTCCTGATGAACATTTCAATATTACACAAAATGCTAAAAGCTCAACAAATGGAAGTGTTACTAAAGCCTCTTCCATGATCTCTCCAATCACTGAAACCAATGAAACATGTTCCACTTCATCATCAATGCAAAGAATGTCAAGTAGCTTGTTGAAAGATAAATTCAACAAAAATGCCAAAGTTGAATGCTTTTCACCTGATGCTGAAAACTCTAGTTCTAGTTTGATTCTTGAGCTGAAGACTGAACTATATGTGTATCTCAACATGTCACTTGAGACTATCATTGACAAAAATGTTTTCAACAATGTAGAGAGGATTGTGAATTCTTTAGCAAGGGAAACTACAGATGCTTTCAAACAGAACATCCTCAAAGACTTTGCAAATCGGTTGAAATTTTTCGAAGAAAGTGTTCCTAAAGCCATGAGCACATTGCAGTCAAGCTCTGAGTTCATGTCCAATTATGTGAACCTTAATATGAAGCTGAATGACAAGTTGAATGAAGGACAAGAAAAAATTGAAAACTTGGAAACCAAACTTTCTGAGACATTGGCAAAAGAGTATACTATTGATATGGAGATTCAAAGATTAATTGATGAAAAAACTGAGATTCTTGCTCAGAAGAACTTTCTTAAATCTCAACTTGATAAGTACACTCAAGTGGTATCTAAGGATTATGAAAAATGGAAAGGTTTAGGAGAGGAACTGAAATCATGCACTGATGGGTGGTTAAAGTCCAAGGAAGATTTAGCTCATGCAAATGCTAGCTGGAAGATCTTAAAGGAGATTTTACTTTTATGA 5475 0.3726 MTSVLSDCFKVIAEKFLDLTIGEARYLCCFKTIVEEHEREKCKLRAKRKGVQENVNVAKNRAEEIVNDVTVWIQNADNIIDENTETKRTCFFGWCPNCMWQYQRGKKLALKTLEIAELKGLNFESVGRAGKLPGVEYHSSQDFIEFESRSSQHKQLLDAIKNDQNYMVGLHGMGGTGKTTLVQKVGNEVKRSNLFDEVIFTTVSHAPDIRKIQDNIAVPLGLKLEEGDQLQRAKKLWSRLTNGERILVILDDVWEELKFEDIGIPSSNNHNACRVLLTSRKMSVCNSMCCQSTIELELLSEEDAKILFEKHTGLRDDSSKSLKKLAQQIANECKRSPVAITAIAKSLKHQPPELWKAAFKSLKEFKQIRNVDEDLKIYKCFQVSYENLKDEKAKKLFMLCSLFPEDYEIPVEDLTRFGKGLGIFGDVDSYEAARIEMLTAKRKLLDACLLLKGREGCVKMHDLVRDAAHWIENYKIQVIMGCKIHATAKKGTMTYLYCHNVKRFSPFLDQLDCTKLKILIILCLDKEGLVEIPQAFFEGTKDLEVLVISKAENIRGKPSLALPQSIESLKNIHTLCLRGFNLGDISMLLKLEMLETLELSDCSIIRLPKGMVKLEKLRLLSLTCCVIEKNPFEVIGKLSQLEELYVMRSLDRFKWKFDKEVVATIFDKYNIIPTLQRYHIQIGHDLGLYHSVDDSISRALSIEYFDPNSNATIKDLVERAEILHLKRIQGDYTTVTPQLVEAIGGEMNDMIHLKLEFCSKIECLIDTNNFSSSIGSIFSKLVKIEVRGMDNLKELCHGPPPSDFFGNMQEISIHLCHQLHGRLFEGNLNLGRIKVFQVEYCRMLTSMFTPSTAASLVLLEELIIEGCKELRNIISYEEKEENIQEHIVQRDDDNDQKVYGSIFPKLKTIDLRMCDQLEFIITECVTSSPSDRLSSEALTLHNAREIRLQKCHLLRQSLILRHVREIRLKNCLKIKVLFSLSVARTMLLEELRIKECHSLKNIITDVGDDQNCVTRGSVFPRLKFLSVQDCSQMEYLLVQDHEEHNNNDTKVHIDLPELEHLTFSRVPKLINTCSIHYNATYPSLKEFCLEGCPEFTINSISDFMFHLGARQLDDTSTEDIGAIMKHLQTLEKLCIENSDIQGIFCLEEHPIIGQQMSSSLQSLKLNNLHDLRYTFMGPKSFMILQNVKTLEIEGCSKLKVIFSASVLRSLPQLTYLEINNCEGLRKIMEDNEENQRHTIPQSQLICFPKLVALVIKSCHSLKSLISVTTFQEFPKLELMIIKEASQLDDMFVRERCDEIPQQKLRLPKLKYLVLMQLPNLTDPSQHMELQNVTYSILDHCPKLSFDSTTTLEDLKNILEDGNIDRDVHWELFEIFDTIVEEAENDNPLSETTHQLPIVQEVQDVQVQSTPQRELPCSQIIDEADKEIVAVHDSRMETSSTDSEVITLTIPCPIPSDIQQCETTQNTDETVEQSLSECPEAEKASTKIWSTNSEARNPSPRPLHIPLQKASSQSFINGKVEEVSTSDETKTSPKLIEKQSIDEQIPMEQGIIRENKSFNGTPDEHFNITQNAKSSTNGSVTKASSMISPITETNETCSTSSSMQRMSSSLLKDKFNKNAKVECFSPDAENSSSSLILELKTELYVYLNMSLETIIDKNVFNNVERIVNSLARETTDAFKQNILKDFANRLKFFEESVPKAMSTLQSSSEFMSNYVNLNMKLNDKLNEGQEKIENLETKLSETLAKEYTIDMEIQRLIDEKTEILAQKNFLKSQLDKYTQVVSKDYEKWKGLGEELKSCTDGWLKSKEDLAHANASWKILKEILLL* 1825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g4996 1824 Gene3D Ribonuclease Inhibitor 1111 1364 IPR032675 -
Mal1g4996 1824 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 138 400 IPR027417 -
Mal1g4996 1824 Gene3D - 132 295 IPR027417 -
Mal1g4996 1824 PANTHER - 1078 1288 - -
Mal1g4996 1824 PANTHER - 13 1096 - -
Mal1g4996 1824 Coils Coil 1717 1744 - -
Mal1g4996 1824 Gene3D - 298 384 IPR042197 -
Mal1g4996 1824 SMART AAA_5 164 312 IPR003593 -
Mal1g4996 1824 Pfam NB-ARC domain 155 387 IPR002182 GO:0043531
Mal1g4996 1824 Gene3D Ribonuclease Inhibitor 491 892 IPR032675 -
Mal1g4996 1824 Gene3D - 385 469 IPR036388 -
Mal1g4996 1824 PANTHER NBS-LRR TYPE DISEASE RESISTANCE PROTEIN 1078 1288 - -
Mal1g4996 1824 Gene3D Ribonuclease Inhibitor 900 1077 IPR032675 -
Mal1g4996 1824 Coils Coil 876 896 - -
Mal1g4996 1824 SUPERFAMILY L domain-like 456 923 - -
Mal1g4996 1824 PRINTS Disease resistance protein signature 167 182 - -
Mal1g4996 1824 PRINTS Disease resistance protein signature 240 254 - -
Mal1g4996 1824 PRINTS Disease resistance protein signature 333 347 - -
Mal1g4996 1824 PRINTS Disease resistance protein signature 589 605 - -
Mal1g4996 1824 PANTHER NBS-LRR TYPE DISEASE RESISTANCE PROTEIN 13 1096 - -
Mal1g4996 1824 SUPERFAMILY RNI-like 803 1294 - -
Mal1g4996 1824 Coils Coil 1752 1772 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g4996 Mal-Chr1 120553492 120560351 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g4996 168 473 WRKY Transcription Factor Family AT5G45050 26.752 3.65e-09 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g4996 - - mtr:MTR_1g031830 3192.13