Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g4992 ATGGAAAGAGATTTCTTGAGTCTATGCTCAAAAGAATCATTTCCAGCGTCAGAGGAAAAGAATAACAATGAAGGGTCAAAAGAATCAGGTTTTACAAAATTTTCACCAGTAAAATGGCCCTTCTTGAACAAAGTCTCTGCTCATTCATATTTGACGCCTTTTAATGTTTCTGAAGAAGATAAAGCTAAAATGATATCTTCTGGTTTCATACAGAAATCTTTCAAACATGATGGACAAGGTGGTATTCATTTTTCTGCAAATCTGTATCCTATACAACACAATGTGAATTATATGAATCGTCCTCATGATGCGAAGATGTTTCCAGTTTCCAATCAAGCAAATTCACTTTCCATGGTACATCCGCTCCTAAAGAATCATCTTGCAACTGTTGGTCAGAATATGAATTGTGCTAATGCGAAGCAATCACTACTTGGTGGAATACCGGTTACCACACCTCATTCAGTTCTTCCGATCGTTGGCACTGTTGCTGGTTTGGTTGAACCATGTGTGAAACCATCTGCACCTGCTCCTCAACTTACCATGTTCTATGGTGGTACTGTGAACATCTTCAATGATATCACTCCTGAGACGGCACAAGCCATCATGTTGTTGGCTGGAAATGGCATATCTGCTGCTTCAAACATGGCTCAACCTGAAGTTCAGGCATCTAGCTCGAAGTTCGCATCAGGTGATGAGGGTCTGCCTATGAGTCCACCTGCAAACATACCACCCTGCTCAGGTATTTCAAGTCCTTTATCTGTTTCTTCACACACTGGTCCACAGTCGAGGAGTGGCTCAAGTAGCAGCGATGAATTTCTGGCTGCTAAAACATCTAGAGGCCCTTCTCCGACCACATCTGCTAGCAAAGTTGTGACTCCAAAAGTAGTCAATGCAACCACCATGCTTCCATCAGCTATACCGCAGGCCCGCAAAGCATCATTGGCTCGATTTTTGGAGAAGCGGAAGGAAAGGGTGATGAGTGCAGCACCATATAACCTCAACAAGAAATCTGAGGATGCACCAATGCCGAATTCAACGGATGCTAACATCTCTGCGAATACTGGTACTAATATGCCGTCATCGAAGCAAGGATGA 1095 0.4292 MERDFLSLCSKESFPASEEKNNNEGSKESGFTKFSPVKWPFLNKVSAHSYLTPFNVSEEDKAKMISSGFIQKSFKHDGQGGIHFSANLYPIQHNVNYMNRPHDAKMFPVSNQANSLSMVHPLLKNHLATVGQNMNCANAKQSLLGGIPVTTPHSVLPIVGTVAGLVEPCVKPSAPAPQLTMFYGGTVNIFNDITPETAQAIMLLAGNGISAASNMAQPEVQASSSKFASGDEGLPMSPPANIPPCSGISSPLSVSSHTGPQSRSGSSSSDEFLAAKTSRGPSPTTSASKVVTPKVVNATTMLPSAIPQARKASLARFLEKRKERVMSAAPYNLNKKSEDAPMPNSTDANISANTGTNMPSSKQG* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g4992 364 MobiDBLite consensus disorder prediction 328 364 - -
Mal1g4992 364 Pfam Jas motif 307 331 IPR018467 -
Mal1g4992 364 PANTHER PROTEIN TIFY 7 16 355 - -
Mal1g4992 364 MobiDBLite consensus disorder prediction 222 289 - -
Mal1g4992 364 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 16 355 IPR040390 -
Mal1g4992 364 Pfam tify domain 175 206 IPR010399 -
Mal1g4992 364 SMART tify_2 172 207 IPR010399 -
Mal1g4992 364 ProSiteProfiles Tify domain profile. 172 207 IPR010399 -
Mal1g4992 364 MobiDBLite consensus disorder prediction 246 289 - -
Mal1g4992 364 MobiDBLite consensus disorder prediction 338 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g4992 Mal-Chr1 120469725 120473254 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g4992 37 337 Tify Gene Family AT3G17860 35.535 4.41e-34 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Mal1g4992 tify 1e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g4992 K13464 - gmx:100799314 366.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g4992 1 120469725 120473254 Mal1g4992 1 120469725 120473254 ECH